DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha6T and PRE6

DIOPT Version :10

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_014604.1 Gene:PRE6 / 854119 SGDID:S000005398 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:239 Identity:72/239 - (30%)
Similarity:122/239 - (51%) Gaps:13/239 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTS---KDTNTLQRKIMPVD 67
            ||...:.:||.|.:||||||:||||:|...||:||.:..||....|::   :||.....|:..:|
Yeast     4 YDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKID 68

  Fly    68 DHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVGL 132
            .||.:|.:||.||:|::.:..|.|..::|.:......|..|...:....|..||....||:||..
Yeast    69 SHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVST 133

  Fly   133 LVAGYD--EQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFE-DCDMDELICHAIQA 194
            |:||:|  :..|.:||..|:....:..|..||..|::.|.:||:|.:..| ...::|.:...:::
Yeast   134 LIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRS 198

  Fly   195 IRG--SLGSDDVENLTINVAIVGKDVPFKMFTEAENQKYVKLVK 236
            :..  ..|:.::|     :.:|..|......:..|..:||..::
Yeast   199 LLEVVQTGAKNIE-----ITVVKPDSDIVALSSEEINQYVTQIE 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 67/216 (31%)
PRE6NP_014604.1 proteasome_alpha_type_7 4..215 CDD:239724 67/215 (31%)

Return to query results.
Submit another query.