DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha6T and PAC1

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_188850.1 Gene:PAC1 / 821774 AraportID:AT3G22110 Length:250 Species:Arabidopsis thaliana


Alignment Length:231 Identity:74/231 - (32%)
Similarity:126/231 - (54%) Gaps:13/231 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCR-TSK--DTNTLQRKIMPV 66
            :||:.||.:||:|||:||||||||:....:.:|:...|..||....: |||  .|:|...|:..:
plant     4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKI 68

  Fly    67 DDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVG 131
            ||||..::||:.:||.::....|.:...|...|....||.:||.:|.:..|..||....||:||.
plant    69 DDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVS 133

  Fly   132 LLVAGYDE-QGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQAI 195
            .|.||:|: .|..:|...|:.|....||.|:|:.:|:|::.|:::.:  :|...:|.:..|::.:
plant   134 FLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYK--DDATREEAVELALKVL 196

  Fly   196 RGSLGSDDVENLTINVAIVGKDVPFKMFTEAENQKY 231
            ..::.|..:.:..:.:|.|       ..|.::..||
plant   197 TKTMDSTSLTSEKLELAEV-------YLTPSKTVKY 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 74/231 (32%)
proteasome_alpha_type_1 6..215 CDD:239718 70/212 (33%)
PAC1NP_188850.1 proteasome_alpha_type_4 3..215 CDD:239721 70/212 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.