DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and PAG1

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_001323455.1 Gene:PAG1 / 817244 AraportID:AT2G27020 Length:351 Species:Arabidopsis thaliana


Alignment Length:280 Identity:73/280 - (26%)
Similarity:121/280 - (43%) Gaps:48/280 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAA--LCRTSKDTNTLQRKIMPVDD 68
            ||...||:||.||:||:|||.:||......||:|..|..|:..  |..:........|:|..|..
plant   110 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHR 174

  Fly    69 HVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVGLL 133
            |.||::|||.||.|.:....::|..:|...|....||:.|...:.:.:...|..:..||:|.|::
plant   175 HAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVI 239

  Fly   134 VAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQAIRGS 198
            :.|||..||.:|.:.|:.........|||...|:|:|.:|:       .::.|:.|         
plant   240 LGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEK-------LNLSEMTC--------- 288

  Fly   199 LGSDDVENLTINVAIVGKDVPFKMFTEAENQKYVKLVKAMDPPLEADHDPLSEEGMSDDDMTDHG 263
                  :...|.||    .:.:|:..||:::.:                .|....:.::...:| 
plant   289 ------KEGVIEVA----KIIYKLHDEAKDKAF----------------ELEMSWICEESKREH- 326

  Fly   264 PSSSGVPPNDTSDMETTAST 283
               ..||.:...:.:|.|.|
plant   327 ---QKVPDDLLEEAKTAAKT 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 66/228 (29%)
proteasome_alpha_type_1 6..215 CDD:239718 63/210 (30%)
PAG1NP_001323455.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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