DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and PAA2

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_178641.1 Gene:PAA2 / 815135 AraportID:AT2G05840 Length:246 Species:Arabidopsis thaliana


Alignment Length:245 Identity:78/245 - (31%)
Similarity:123/245 - (50%) Gaps:18/245 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDNDTTTWSPQGRLFQVEYAMEAVK-QGAATVGLKGTDYAVLAALCRTSK--------DTNTLQR 61
            ||...|.:||:|||||||||.:||| .|..::|::|.|     ::|..::        |.:::..
plant     9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKD-----SVCVVTQKKVPDKLLDQSSVSH 68

  Fly    62 KIMPVDDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRR 126
             :.||..::|:...|:|||:|.:.|..|.|...:|..|..|.|...|...:.:|.|..||....|
plant    69 -LFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMR 132

  Fly   127 PYGVGLLVAGYDEQ-GPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICH 190
            |.||..:|.|.||: ||.:|:..|..:....||.:.|.:.|.|..:||:.|:.......||.:..
plant   133 PLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQT 197

  Fly   191 AIQAIRGSLGSDDVENLTINVAIVGKDVP-FKMFTEAENQKYVKLVKAMD 239
            ||.|::..| .:|.:...|.|.:|..|.| |:.....|..:::..:...|
plant   198 AISALQSVL-QEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLTAISERD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 77/237 (32%)
proteasome_alpha_type_1 6..215 CDD:239718 72/218 (33%)
PAA2NP_178641.1 proteasome_alpha_type_6 8..220 CDD:239723 72/217 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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