DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and psmb3

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_001123295.1 Gene:psmb3 / 573095 ZFINID:ZDB-GENE-040426-2682 Length:205 Species:Danio rerio


Alignment Length:197 Identity:45/197 - (22%)
Similarity:90/197 - (45%) Gaps:22/197 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GAATVGLKGTDYAVLAALCR---TSKDTNTLQRKIMPVDDHVGMSIAGLTADARVVCQYMRTECM 93
            |.|.:.::|.:...:|:..|   .::...|..:||.|:.:.:.:.:|||..|.:.|.|.::....
Zfish     8 GGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDVQTVSQRLKFRLN 72

  Fly    94 AYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRR--PYGVGLLVAGYDEQGPHIYQ-VMPTANVLN 155
            .|......:...|..:|.:.|.|      |:||  ||.:..::||.|   |..:: .:.:.:::.
Zfish    73 LYELKEGRQIKPRTFMSMVSNLL------YERRFGPYYIEPVIAGLD---PKTFEPFICSLDLIG 128

  Fly   156 CKAMA---IGSRSQSARTYLERNMESFEDCDM--DELICHAIQAIRGSLGSDDVENLTINVAIVG 215
            |..:.   :.|.:.|.:.|  ...||..:.||  ::|.....||:..::..|.|..:.:.|.::.
Zfish   129 CPMVTEDFVVSGTCSEQMY--GMCESLWEPDMKPEDLFETISQAMLNAVDRDAVSGMGVVVHVIE 191

  Fly   216 KD 217
            ||
Zfish   192 KD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 45/197 (23%)
proteasome_alpha_type_1 6..215 CDD:239718 43/193 (22%)
psmb3NP_001123295.1 PRE1 3..198 CDD:223711 45/197 (23%)
proteasome_beta_type_3 6..201 CDD:239728 45/197 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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