DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and PSMB2

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_002785.1 Gene:PSMB2 / 5690 HGNCID:9539 Length:201 Species:Homo sapiens


Alignment Length:180 Identity:50/180 - (27%)
Similarity:74/180 - (41%) Gaps:45/180 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VGLKGTDYAVLAALCRTSKDTNTLQRKIMPVDDH---------VGMSIAGLTADARVVCQYMRTE 91
            :|::|.|| ||.|..|.:. :|.:|.|    |||         :.:...|...|.....:|::..
Human     5 IGIQGPDY-VLVASDRVAA-SNIVQMK----DDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

  Fly    92 CMAY--RHSYN------AEFPVRRLVSNLGNKLQTTTQRYDRRPYGVGLLVAGYDE-QGPHIYQV 147
            ...|  |:.|.      |.|..|    ||.:.|::      |.||.|.||:||||| :||.:|.:
Human    64 VQLYKMRNGYELSPTAAANFTRR----NLADCLRS------RTPYHVNLLLAGYDEHEGPALYYM 118

  Fly   148 MPTANVLNCKAMAIG----------SRSQSARTYLERNMESFEDCDMDEL 187
            ...|.:......|.|          .|..:.....||.:|....| ::||
Human   119 DYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC-LEEL 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 50/180 (28%)
proteasome_alpha_type_1 6..215 CDD:239718 50/180 (28%)
PSMB2NP_002785.1 proteasome_beta_type_2 1..192 CDD:239727 50/180 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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