DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and psma3

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_001011257.1 Gene:psma3 / 496707 XenbaseID:XB-GENE-976787 Length:255 Species:Xenopus tropicalis


Alignment Length:271 Identity:80/271 - (29%)
Similarity:127/271 - (46%) Gaps:43/271 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLK-------GTDYAVLAALCRTSKDTNTLQRKI 63
            ||...:|:||.||:||||||.:||:..:..:|::       |.:..||:.|.....:     ::|
 Frog     8 YDLSASTFSPDGRVFQVEYAAKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSN-----KRI 67

  Fly    64 MPVDDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPY 128
            ..||.||||::|||.||||.:....|.|...:|.:|..:.|::.|...:...:...|.....||:
 Frog    68 FNVDRHVGMAVAGLLADARSLADIAREEASNFRANYGYDIPLKHLSDRVAMYVHAYTLYSAVRPF 132

  Fly   129 GVGLLVAGYDE-QGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLER-NMESFEDCDMDELICHA 191
            |...::..|:| .|..:|.|.|:.........|||...|:|:|.:|: .|:.....|:.:.:...
 Frog   133 GCSFMLGSYNEDDGAQLYMVDPSGISYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRDVVKEVAKI 197

  Fly   192 IQAIRGSLGSDDVENLTINVAI--VGK-------DVPFKMFTEAENQKYVKLVKAMDPPLEADHD 247
            |..:.     |:|::.:..:.:  |||       .||..:..|||  ||.|             :
 Frog   198 IYIVH-----DEVKDKSFELELSWVGKITNGKHEIVPKDIREEAE--KYAK-------------E 242

  Fly   248 PLSEEGMSDDD 258
            .|.||..||||
 Frog   243 SLEEEDDSDDD 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 72/244 (30%)
proteasome_alpha_type_1 6..215 CDD:239718 62/219 (28%)
psma3NP_001011257.1 proteasome_alpha_type_3 5..217 CDD:239720 62/218 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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