DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and psma5

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_991271.1 Gene:psma5 / 403011 ZFINID:ZDB-GENE-040625-96 Length:241 Species:Danio rerio


Alignment Length:255 Identity:81/255 - (31%)
Similarity:133/255 - (52%) Gaps:38/255 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF--RNQYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSK---DTNTLQ 60
            ||  |::||....|:||:|||||||||:||:|.|:..:|::.::...||...|.:.   :.::::
Zfish     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIE 65

  Fly    61 RKIMPVDDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVR---RLVSNLGNKLQTTTQR 122
             ||:.:|.|:|.:::||.|||:.:....|.|...:..:||....|.   :.||||.  ||...:.
Zfish    66 -KIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA--LQFGEED 127

  Fly   123 YD----RRPYGVGLLVAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCD 183
            .|    .||:||.||..|.||:||.:|.:.|:...:.|.|.||||.|:.|::.|:.         
Zfish   128 ADPGAMSRPFGVALLFGGVDEKGPQLYHMDPSGTFVQCDARAIGSASEGAQSSLQE--------- 183

  Fly   184 MDELICHAIQAIRGSLGS---------DDVENLT-INVAIVGKDVPFKMFTEAENQKYVK 233
                :.|....::.::.|         ::..|.| |.:|.|.....|.|:|:.|.:..:|
Zfish   184 ----VYHKSMTLKDAIKSSLTILKQVMEEKLNATNIELATVEPGKTFHMYTKEELEDVIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 77/248 (31%)
proteasome_alpha_type_1 6..215 CDD:239718 72/228 (32%)
psma5NP_991271.1 proteasome_alpha_type_5 8..220 CDD:239722 72/227 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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