DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and psma6

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_989113.1 Gene:psma6 / 394718 XenbaseID:XB-GENE-943786 Length:246 Species:Xenopus tropicalis


Alignment Length:228 Identity:70/228 - (30%)
Similarity:116/228 - (50%) Gaps:8/228 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDNDTTTWSPQGRLFQVEYAMEAVKQGAAT-VGLKGTDYAVLAALCRTSK---DTNTLQRKIMPV 66
            :|...|.:||:|||:|||||.:|:.||..| |.::|.|.||:....:...   |:||:.. :..:
 Frog     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKLLDSNTVTH-LFRI 72

  Fly    67 DDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVG 131
            .:.:|..:.|:|||:|...|..|.|...:::.|..|.||..|...:.:..|..||..:.||.|..
 Frog    73 TESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCC 137

  Fly   132 LLVAGYDEQ-GPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQAI 195
            :::.|.||: ||.:::..|.......||...|.:...|.::||:.::...|...::.:..||..:
 Frog   138 MILIGVDEENGPQVFKCDPAGYYCGFKATTAGVKQTEATSFLEKKVKKKLDWTYEQTLETAISCL 202

  Fly   196 RGSLGSD-DVENLTINVAIVGKDVPFKMFTEAE 227
            ...|..| ....|.:.|..| :|..|::.||||
 Frog   203 STVLSIDFKPSELEVGVVTV-EDPKFRVLTEAE 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 70/228 (31%)
proteasome_alpha_type_1 6..215 CDD:239718 63/214 (29%)
psma6NP_989113.1 proteasome_alpha_type_6 8..220 CDD:239723 62/211 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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