DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and psma4

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_999862.1 Gene:psma4 / 326687 ZFINID:ZDB-GENE-040426-1932 Length:261 Species:Danio rerio


Alignment Length:251 Identity:75/251 - (29%)
Similarity:129/251 - (51%) Gaps:14/251 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSK---DTNTLQRKIMPV 66
            :||:.||.:||:|||:||||||||:......:|:...|..:|||..|...   |......||..:
Zfish     4 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKL 68

  Fly    67 DDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVG 131
            ::.:..|:||:|:||.|:...:|.....|...|....|..:||:.|.:..|..||...:||:||.
Zfish    69 NEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVS 133

  Fly   132 LLVAGYDEQ-GPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQAI 195
            ||..|:|:. |..:||..|:.|....||..||:.|.:|.:.|:::.:..| ..:...:..|::.:
Zfish   134 LLYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGE-MTLSAALALAVKVL 197

  Fly   196 RGSLGSDDVENLT---INVAIVGKD---VPFKMFTEAENQKYVKLVKAMDPPLEAD 245
            ..::   ||..|:   :.:|.:.::   ...|:..:.|.::.:|..:|.:...|.|
Zfish   198 NKTM---DVSKLSAEKVEIATLTRENGKTKIKVLKQKEVEELIKKHEAEEAKAEKD 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 71/237 (30%)
proteasome_alpha_type_1 6..215 CDD:239718 69/215 (32%)
psma4NP_999862.1 PTZ00246 1..237 CDD:173491 71/236 (30%)
proteasome_alpha_type_4 3..216 CDD:239721 69/215 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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