Protein Alignment Prosalpha6T and Psma6

DIOPT Version :10

• Sequence 1: NP_609623.1
• Gene: Prosalpha6T / 34726
• FlyBaseID: FBgn0032492
• Length: 289
• Species: Drosophila melanogaster
• Sequence 2: NP_058979.1
• Gene: Psma6 / 29673
• RGDID: 61849
• Length: 246
• Species: Rattus norvegicus
• Alignment Length: 232
• Identity: 74/232 - (31%)
• Similarity: 121/232 - (52%)
• Gaps: 16/232 - (6%)

  Fly     6 YDNDTTTWSPQGRLFQVEYAMEAVKQGAAT-VGLKGTDYAVLAALCRTSK-------DTNTLQRK 62
            :|...|.:||:|||:|||||.:|:.||..| |.::|.|.||:.    |.|       |::|:..
  Rat     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIV----TQKKVPDKLLDSSTVTH- 68

  Fly    63 IMPVDDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRP 127
            :..:.:::|..:.|:|||:|...|..|.|...:::.|..|.||..|...:.:..|..||..:.||
  Rat    69 LFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRP 133

  Fly   128 YGVGLLVAGYD-EQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHA 191
            .|..:::.|.| ||||.:|:..|.......||.|.|.:...:.::||:.::...|...::.:..|
  Rat   134 LGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETA 198

  Fly   192 IQAIRGSLGSDDVENLTINVAIVGKDVP-FKMFTEAE 227
            |..:...| |.|.:...|.|.:|..:.| |::.||||
  Rat   199 ITCLSTVL-SIDFKPSEIEVGVVTVENPKFRILTEAE 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha6T	NP_609623.1	proteasome_alpha_type_1	6..215	CDD:239718	67/217 (31%)
Psma6	NP_058979.1	proteasome_alpha_type_6	8..220	CDD:239723	67/216 (31%)