DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and Psmb5

DIOPT Version :10

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:189 Identity:42/189 - (22%)
Similarity:81/189 - (42%) Gaps:9/189 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GAATVGLKGTDYAVLAALCRTSKD---TNTLQRKIMPVDDHVGMSIAGLTADARVVCQYMRTECM 93
            |..|:..|.....::||..|.:..   .:...:|::.::.::..::||..||.....:.:..:|.
Mouse    59 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCR 123

  Fly    94 AYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVGLLVAGYDEQGPHIYQVMPTANVLNCKA 158
            .| ...|.|   |..|:.....|.....:|......:|.::.|:|::||.:|.|....|.::..|
Mouse   124 IY-ELRNKE---RISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTA 184

  Fly   159 MAIGSRSQSARTYLERNMESFEDCDMDELICHAIQAIRGSLGSDDVENLTINVAIVGKD 217
            .::||.|..|...::|...  .|..::|....|.:||..:...|......:|:..|.:|
Mouse   185 FSVGSGSVYAYGVMDRGYS--YDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVRED 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 40/185 (22%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 41/188 (22%)

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