DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and pas-6

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_504472.1 Gene:pas-6 / 178943 WormBaseID:WBGene00003927 Length:260 Species:Caenorhabditis elegans


Alignment Length:230 Identity:115/230 - (50%)
Similarity:164/230 - (71%) Gaps:5/230 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRNQYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSKDTNTLQRKIMP 65
            |||||||.|.|.|||||||.|||||:||:|||:||||:|...:||:.||.|...|.::.|:|:..
 Worm     1 MFRNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQKKVYE 65

  Fly    66 VDDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGV 130
            :|.|.|:|||||.:|.|::.:|::|||.::|..|....|:::|..::..|||..||.|.|||:||
 Worm    66 IDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGV 130

  Fly   131 GLLVAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQAI 195
            |:|:||||:.|.||.|..|:|.|::....:||:||||||||||||:::||....::||.||:.|:
 Worm   131 GILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLAL 195

  Fly   196 RGSLGSDDVENL---TINVAIVGKDVPFKMFTEAE 227
            |.:|.::  |||   ..::.|||||.||.:..:|:
 Worm   196 RDTLPAE--ENLNAQNTSIGIVGKDSPFSLLEDAQ 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 112/227 (49%)
proteasome_alpha_type_1 6..215 CDD:239718 103/211 (49%)
pas-6NP_504472.1 PRE1 4..237 CDD:223711 112/227 (49%)
proteasome_alpha_type_1 6..216 CDD:239718 103/211 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158520
Domainoid 1 1.000 178 1.000 Domainoid score I2120
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2080
Inparanoid 1 1.050 246 1.000 Inparanoid score I2041
Isobase 1 0.950 - 0 Normalized mean entropy S372
OMA 1 1.010 - - QHG53705
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0003679
OrthoInspector 1 1.000 - - otm14740
orthoMCL 1 0.900 - - OOG6_102143
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1003
SonicParanoid 1 1.000 - - X2552
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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