DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and pas-7

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_496177.2 Gene:pas-7 / 174571 WormBaseID:WBGene00003928 Length:250 Species:Caenorhabditis elegans


Alignment Length:266 Identity:68/266 - (25%)
Similarity:122/266 - (45%) Gaps:33/266 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAA--LCRTSKDTNTLQRKIMPVDD 68
            ||...:|:||.||:||||||.:||......:.::|.:..|:.|  |..:...|:....::..|:|
 Worm     8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVND 72

  Fly    69 HVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVGLL 133
            :||:::||...|...:..|...|.|.:...|....|::.:.:::...:...|.... ||:|.|..
 Worm    73 NVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGIS-RPFGAGAF 136

  Fly   134 VAGYDEQ-GPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQAIRG 197
            ...:::| |..::.|.|:......||.|:|...|:|:..:|:  ...|:.|:::|:..|.:.|..
 Worm   137 FMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK--LKIEELDVNQLVKEAARIIMV 199

  Fly   198 SLGSDDVENLTINVAIVG-------KDVPFKMFTEAENQKYVKLVKAMDPPLEADHDPLSEEGMS 255
            ....:..:|:.|.:..||       ::||.::.|.||.....||                    .
 Worm   200 VRDENKDKNVQIEMGWVGEQTNGKYEEVPSEVVTAAEEWAIAKL--------------------D 244

  Fly   256 DDDMTD 261
            :|||.|
 Worm   245 EDDMDD 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 62/236 (26%)
proteasome_alpha_type_1 6..215 CDD:239718 55/211 (26%)
pas-7NP_496177.2 proteasome_alpha_type_3 5..216 CDD:239720 55/210 (26%)
PRE1 6..231 CDD:223711 59/225 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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