DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and pbs-5

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_493558.1 Gene:pbs-5 / 173334 WormBaseID:WBGene00003951 Length:284 Species:Caenorhabditis elegans


Alignment Length:251 Identity:59/251 - (23%)
Similarity:93/251 - (37%) Gaps:65/251 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSKD---TNTLQRKIMPV 66
            |:...|||.:     |..|.|..|.|.|           .::|...|.|..   ::....||:.:
 Worm    60 QFRKGTTTLA-----FVYEPATPADKGG-----------IIVAVDSRASSGEYISSKSVMKILDI 108

  Fly    67 DDHVGMSIAGLTAD----ARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRP 127
            .|.:..::||..||    .|:|.:|    |..|.........|........|.|      |..|.
 Worm   109 GDRMVATMAGGAADCQFWTRIVAKY----CTLYELREKTSITVSAASKYFANTL------YGYRG 163

  Fly   128 YG--VGLLVAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNME------------- 177
            .|  ||.:|||||::||.|::|....:....|..::||.|.:|...|:.:.:             
 Worm   164 QGLSVGSMVAGYDKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDDEARKLGL 228

  Fly   178 ------SFED------CDMDELICHAIQAIRGSLGSDDVENLTINVA-IVGKDVPF 220
                  ::.|      |:    :||.....:..|...||..|....| .:|:|:.:
 Worm   229 RAIMHATYRDSGSGGVCN----LCHITPTEKIRLPPMDVSKLWYEFADELGRDITY 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 59/251 (24%)
proteasome_alpha_type_1 6..215 CDD:239718 56/243 (23%)
pbs-5NP_493558.1 Ntn_hydrolase 65..252 CDD:320988 51/216 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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