DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and pas-5

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_492765.1 Gene:pas-5 / 172942 WormBaseID:WBGene00003926 Length:248 Species:Caenorhabditis elegans


Alignment Length:252 Identity:85/252 - (33%)
Similarity:140/252 - (55%) Gaps:18/252 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF--RNQYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCR-TSK-DTNTLQR 61
            ||  |::||....|:||:|||||||||:||||.|:.::|:|.::..:|||..| ||| ..|....
 Worm     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIE 65

  Fly    62 KIMPVDDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGN-KLQ---TTTQR 122
            ||..||.|:|::.|||.||:|.:.:..:.|...:..:||.:..|..:..::.| .||   ...:.
 Worm    66 KISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKA 130

  Fly   123 YDRRPYGVGLLVAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNM-ESFEDC-DMD 185
            ...||:||.:|.||.|::|..::.:.|:...::|||.:||:.|..|    |:|: |.:.|. .:.
 Worm   131 SMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGA----EQNLKEQYHDALTIK 191

  Fly   186 ELICHAI----QAIRGSLGSDDVENLTINVAIVGKDVPFKMFTEAENQKYVKLVKAM 238
            |.:..|:    |.:...|.|.:||.:.|...:..|..|...||...|::..:::.::
 Worm   192 EGLKMALAILKQVMEEKLNSANVEVVVIKPTVDAKGRPIGEFTRVSNEELDQVITSL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 82/240 (34%)
proteasome_alpha_type_1 6..215 CDD:239718 77/220 (35%)
pas-5NP_492765.1 PRK03996 8..248 CDD:235192 82/243 (34%)
proteasome_alpha_type_5 8..219 CDD:239722 76/214 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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