DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha6T and pas-3

DIOPT Version :9

Sequence 1:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_001379751.1 Gene:pas-3 / 172139 WormBaseID:WBGene00003924 Length:250 Species:Caenorhabditis elegans


Alignment Length:254 Identity:81/254 - (31%)
Similarity:139/254 - (54%) Gaps:20/254 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSK---DTNTLQRKIMPV 66
            :||:.||.:||:|||:||||||||:......:|:..::..|:||..:...   |.:.:..|:..:
 Worm     4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRL 68

  Fly    67 DDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVG 131
            .|::..::||:||||.::..::|....:||:||..|.||.:||.||.|:.|..||...:||:||.
 Worm    69 SDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVS 133

  Fly   132 LLVAGYDEQ-GPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQAI 195
            ||..|:|:. |..:||..|:.|....||..|||..|:|.|.|:   :.::..:::|....||:.:
 Worm   134 LLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLK---QEYKSPNLEEAKQLAIKVL 195

  Fly   196 RGSLGSDDVENLTINVAIVGKDVPFKMFTEAENQKYVK--LVKAMDPPLEADHDPLSEE 252
            .          .|::|.:..:.|...:.|..:.:..::  ..|.:| .|.|:|:...:|
 Worm   196 W----------KTLDVKLASEKVEMAVLTRRDGKTVLEELTTKEVD-ALIAEHEKKEKE 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha6TNP_609623.1 PRE1 4..233 CDD:223711 75/231 (32%)
proteasome_alpha_type_1 6..215 CDD:239718 73/212 (34%)
pas-3NP_001379751.1 proteasome_alpha_type_4 3..213 CDD:239721 74/221 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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