DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16812 and RGD1307554

DIOPT Version :9

Sequence 1:NP_609619.1 Gene:CG16812 / 34722 FlyBaseID:FBgn0032488 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001103134.1 Gene:RGD1307554 / 292739 RGDID:1307554 Length:413 Species:Rattus norvegicus


Alignment Length:465 Identity:117/465 - (25%)
Similarity:174/465 - (37%) Gaps:160/465 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SAARWVKFFNAAGIPSPAAAGYAHVFVENRIQDDMLLDLNKEYLREMGITLMGDIIAILRHSKTV 69
            :.:.|::||..||||...|..||.:||:||||..||||||||.:.|:|:|::|||||||:|:|.|
  Rat    33 ATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVV 97

  Fly    70 -----CEQNAREQVLTTEVVQSVVR--------------------PVSPKPKAPVATPKAKVYPP 109
                 |:........|...:|..:|                    |.:|..::..:|.|..|...
  Rat    98 HRQDMCKAATASVPCTPSPLQGELRRGASSAASRMIANSLNHDSPPHTPARRSDNSTSKISVTVS 162

  Fly   110 AKPA-----------------------RRVLPEHEGKYKVTLPSGTTERSKQILAKREKLYSDRV 151
            .|.|                       |||..|.||||.:.:|.|||.|:::||.:::     ..
  Rat   163 NKVAVKNAKAAALAHREEESLVVPTKRRRVTAEMEGKYIIHMPKGTTPRTRKILEQQQ-----AA 222

  Fly   152 SSSKKSDIFTRLHAEDEAQEGIVSSSGESSVRVHVAGASKTAATSSNNSVFARLGGKQGALPE-- 214
            ....::.:|.||.||.:|.                     |...:....||:||    ||.||  
  Rat   223 KGLHRTSVFDRLGAETKAD---------------------TTTGTKPTGVFSRL----GATPEMD 262

  Fly   215 -----------EFTSTREIKSILKNTHRTVGGGGGGGGVTKNSP----IVKAKKVAAVTQQKVML 264
                       ..:|..:...:||..         |.|.||.||    .||||..::.|      
  Rat   263 EELAWDSDNDSSSSSVLQYAGVLKKL---------GRGPTKASPQPALTVKAKATSSAT------ 312

  Fly   265 VHKVPLKKGDDDDDSMDDFESDEEDYMSSGEDFDMGAGEKIVKFASTAEVREI-VPESAYKNRQG 328
                                                      ..|||.::|.: :|......::.
  Rat   313 ------------------------------------------TLASTPKLRRLALPSRPGPEKKP 335

  Fly   329 KSFAN-NIKSRLG---MVSKLHATKKTYNLKASPARKPQARLSPVKGKTIRMRSDELFSRQD--- 386
            :|... :|..|||   :||:...::.|.....|......|....:.|......|:.|.::.|   
  Rat   336 ESLPKVSILKRLGKAAVVSEAQDSQVTSTKSKSSTEVKFAIKRTLVGPRGSSSSESLGAQMDHAG 400

  Fly   387 TVPVHRRLGK 396
            ||.|.:|||:
  Rat   401 TVSVFKRLGR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16812NP_609619.1 SAM_CS047 6..70 CDD:188930 37/68 (54%)
SAM <26..72 CDD:197735 30/50 (60%)
RGD1307554NP_001103134.1 SAM_CS047 34..98 CDD:188930 36/63 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..156 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 289..316 11/74 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340638
Domainoid 1 1.000 84 1.000 Domainoid score I8123
eggNOG 1 0.900 - - E1_KOG3930
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1034351at2759
OrthoFinder 1 1.000 - - FOG0007515
OrthoInspector 1 1.000 - - oto96655
orthoMCL 1 0.900 - - OOG6_109403
Panther 1 1.100 - - LDO PTHR21359
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6403
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.710

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