DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16812 and F53F8.5

DIOPT Version :10

Sequence 1:NP_609619.1 Gene:CG16812 / 34722 FlyBaseID:FBgn0032488 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_507998.1 Gene:F53F8.5 / 186182 WormBaseID:WBGene00010002 Length:368 Species:Caenorhabditis elegans


Alignment Length:493 Identity:117/493 - (23%)
Similarity:174/493 - (35%) Gaps:177/493 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WVKFFNAAGIPSPAAAGYAHVFVENRIQDDMLLDLNKEYLREMGITLMGDIIAILRH---SKTVC 70
            |.:||..|||||..|..||..|..|||..:||.:|:|..|.|:|::.:||.:.|||.   :|:..
 Worm     4 WTQFFVRAGIPSEIAKKYAKSFATNRITKEMLPELDKSTLSELGVSAIGDQLCILRRIKAAKSAI 68

  Fly    71 EQNAREQVLTTEVVQSVVRPVSPKPKAPVATPKAKVYPP---------------AKPARRVLPEH 120
            |:.|.|             .:..:|::..|..||::..|               .||.    |:.
 Worm    69 EREAEE-------------AIQEEPQSKPAANKARITAPGALLASSSSSSEHRRGKPP----PDR 116

  Fly   121 EGKYKVTLPSGTTERSKQILAKREKLYSD---------------RVSSSKKSDIFTRLHAEDEAQ 170
            ...|.|.:|.|.|.|::|||.|.|.:...               .||...||.:..|:..:|..:
 Worm   117 HEIYHVKMPDGNTHRTRQILQKAEVMRQQGLAVRGTTGVRQGGRSVSPIDKSSLAARMKRKDAPE 181

  Fly   171 EGIVSSSGESSV-----RVHVAGASKTAATSSNNSVFARLGGKQGALPEEFTSTREIKSILKNTH 230
              :.||:....:     |:..:|..||.   ||.   ..|..:....|...||:..|.       
 Worm   182 --VTSSTDRRHISSKISRISQSGIKKTI---SNR---PPLNSRLTQSPAAATSSLRIH------- 231

  Fly   231 RTVGGGGGGGGVTKNSPIVKAKKVAAVTQQKVMLVHKVPLKKGDDDDDSMDDFESDE--EDYMSS 293
              ||..|.......:..:.|..  .|.:...|:|:           ||:| |:|.||  |:.:..
 Worm   232 --VGPNGRSKASRMDGRLQKVS--TAASSSDVLLI-----------DDNM-DYEDDEIVEEVVDY 280

  Fly   294 GEDFDMGAGEKIVKFASTAEVREIVPESAYKNRQGKSFANNIKSRLGMVSKLHATKKTYNLKASP 358
            .|| :||                                             ::....|::..:|
 Worm   281 EED-EMG---------------------------------------------YSDAPIYDVVDAP 299

  Fly   359 ARKPQARLSPVKGKTIRMRSDELFSRQDTVPVHRRLGKTATSAPLRAPPAPP--------HRQPR 415
            .|:   |:|...|                     ||..|...||.|| .||.        |.|||
 Worm   300 VRQ---RISYSSG---------------------RLSSTVQRAPPRA-SAPSSSSRSAHHHHQPR 339

  Fly   416 PEPQKKYVPPRRHNSMNAGHSRQRDQSGSVFDRLGFNN 453
                     ..||::.:.| ......|.:||:||.||:
 Worm   340 ---------HHRHDTSSRG-GAPSSSSSNVFNRLSFNS 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16812NP_609619.1 SAM_CS047 6..70 CDD:188930 28/63 (44%)
DUF5577 <109..>215 CDD:407613 31/140 (22%)
F53F8.5NP_507998.1 SAM_CS047 1..65 CDD:188930 27/60 (45%)

Return to query results.
Submit another query.