Protein Alignment Ski6 and RRP46

DIOPT Version :9

• Sequence 1: NP_001260437.1
• Gene: Ski6 / 34721
• FlyBaseID: FBgn0032487
• Length: 246
• Species: Drosophila melanogaster
• Sequence 2: NP_011609.2
• Gene: RRP46 / 852987
• SGDID: S000003327
• Length: 223
• Species: Saccharomyces cerevisiae
• Alignment Length: 242
• Identity: 63/242 - (26%)
• Similarity: 107/242 - (44%)
• Gaps: 55/242 - (22%)

  Fly    26 IKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGNQ-------TESVINCQYSQATFSTAERK 83
            ::.::|:.:..|||:.....:|||:.:|.||.:.|..|       .|.::......||  |.|
Yeast     3 VQAEIGILDHVDGSSEFVSQDTKVICSVTGPIEPKARQELPTQLALEIIVRPAKGVAT--TRE-- 63

  Fly    84 NRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEVLQ--DDGANYAV-----ALNAATLA 141
                   |.||.|  |:..|:..|....|||....|..::|:  :|.|.:::     .:|||.||
Yeast    64 -------KVLEDK--LRAVLTPLITRHCYPRQLCQITCQILESGEDEAEFSLRELSCCINAAFLA 119

  Fly   142 LIDAGICLN---------------EFIVACTASLSKSNIPLTDISQFEEVSGGPKLTVAALPTAE 191
            |:||||.||               :.||..||...|.::.:..:: .|.|:||        ...:
Yeast   120 LVDAGIALNSMCASIPIAIIKDTSDIIVDPTAEQLKISLSVHTLA-LEFVNGG--------KVVK 175

  Fly   192 KIAFLEMSERFHIDHLETVIETAMAGCRE----IRDILEAAVKEHLL 234
            .:..|:.:..|:.|.|.:::|.....|:|    ||.|::..:...|:
Yeast   176 NVLLLDSNGDFNEDQLFSLLELGEQKCQELVTNIRRIIQDNISPRLV 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ski6	NP_001260437.1	PRK03983	7..231	CDD:235187	62/237 (26%)
		RNase_PH_RRP41	12..233	CDD:206775	62/239 (26%)
RRP46	NP_011609.2	RNase_PH_RRP46	4..210	CDD:206777	59/227 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0689
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53663
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820