Protein Alignment Ski6 and Exosc5

DIOPT Version :10

• Sequence 1: NP_609618.2
• Gene: Ski6 / 34721
• FlyBaseID: FBgn0032487
• Length: 246
• Species: Drosophila melanogaster
• Sequence 2: NP_001100963.2
• Gene: Exosc5 / 308441
• RGDID: 1307861
• Length: 235
• Species: Rattus norvegicus
• Alignment Length: 227
• Identity: 65/227 - (28%)
• Similarity: 104/227 - (45%)
• Gaps: 29/227 - (12%)

  Fly     7 LLSEQGLRLDGRRP-HELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGNQTESVINC 70
            :|::.|.....|.| ..||...|:..:..:|||||...||:|.|||.||||.:.|  .::.:.|
  Rat    11 VLTDTGTESSPRSPVCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVK--VSKEIFN- 72

  Fly    71 QYSQATFSTAER----------KNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEVLQ 125
               :||.....|          |:|.|..|.:.|          |.:...|:||:.|.:.::|:.
  Rat    73 ---KATLEVILRPKIGLPGVAEKSRERLIRNTCE----------AVVLGALHPRTSITVVLQVVS 124

  Fly   126 DDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFEEVSGGPKLTVAALPTA 190
            |.|:..|..||||.:||:|||:.:.......|.:|......:.|.:..:|......||. ||.:|
  Rat   125 DTGSLLACCLNAACMALVDAGVPMRALFCGVTCALDPDGNLVLDPTTKQEKEARAILTF-ALDSA 188

  Fly   191 EKIAFLEMSERFHID-HLETVIETAMAGCREI 221
            |:...:..::..:.| .|:..:..|.|..:.|
  Rat   189 EQKLLMSATKGLYSDAELQQCLAAAQAASQHI 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ski6	NP_609618.2	RNase_PH_RRP41	12..233	CDD:206775	64/222 (29%)
Exosc5	NP_001100963.2	RNase_PH_RRP46	28..225	CDD:206777	61/210 (29%)