Protein Alignment Ski6 and Exosc5

DIOPT Version :9

• Sequence 1: NP_001260437.1
• Gene: Ski6 / 34721
• FlyBaseID: FBgn0032487
• Length: 246
• Species: Drosophila melanogaster
• Sequence 2: NP_001100963.2
• Gene: Exosc5 / 308441
• RGDID: 1307861
• Length: 235
• Species: Rattus norvegicus
• Alignment Length: 227
• Identity: 65/227 - (28%)
• Similarity: 104/227 - (45%)
• Gaps: 29/227 - (12%)

  Fly     7 LLSEQGLRLDGRRP-HELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGNQTESVINC 70
            :|::.|.....|.| ..||...|:..:..:|||||...||:|.|||.||||.:.|  .::.:.|
  Rat    11 VLTDTGTESSPRSPVCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVK--VSKEIFN- 72

  Fly    71 QYSQATFSTAER----------KNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEVLQ 125
               :||.....|          |:|.|..|.:.|          |.:...|:||:.|.:.::|:.
  Rat    73 ---KATLEVILRPKIGLPGVAEKSRERLIRNTCE----------AVVLGALHPRTSITVVLQVVS 124

  Fly   126 DDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFEEVSGGPKLTVAALPTA 190
            |.|:..|..||||.:||:|||:.:.......|.:|......:.|.:..:|......||. ||.:|
  Rat   125 DTGSLLACCLNAACMALVDAGVPMRALFCGVTCALDPDGNLVLDPTTKQEKEARAILTF-ALDSA 188

  Fly   191 EKIAFLEMSERFHID-HLETVIETAMAGCREI 221
            |:...:..::..:.| .|:..:..|.|..:.|
  Rat   189 EQKLLMSATKGLYSDAELQQCLAAAQAASQHI 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ski6	NP_001260437.1	PRK03983	7..231	CDD:235187	65/227 (29%)
		RNase_PH_RRP41	12..233	CDD:206775	64/222 (29%)
Exosc5	NP_001100963.2	ECX1	10..232	CDD:131120	65/227 (29%)
		RNase_PH_RRP46	28..225	CDD:206777	61/210 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0689
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53663
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820