DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ski6 and tin-9.2

DIOPT Version :9

Sequence 1:NP_001260437.1 Gene:Ski6 / 34721 FlyBaseID:FBgn0032487 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001379430.1 Gene:tin-9.2 / 24105311 WormBaseID:WBGene00044083 Length:111 Species:Caenorhabditis elegans


Alignment Length:10 Identity:4/10 - (40%)
Similarity:7/10 - (70%) Gaps:0/10 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 DAGICLNEFI 153
            |.|.|:::.|
 Worm    40 DEGSCVSQCI 49

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ski6NP_001260437.1 PRK03983 7..231 CDD:235187 4/10 (40%)
RNase_PH_RRP41 12..233 CDD:206775 4/10 (40%)
tin-9.2NP_001379430.1 zf-Tim10_DDP 4..63 CDD:397210 4/10 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S936
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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