DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and MTRFR

DIOPT Version :9

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001137377.1 Gene:MTRFR / 91574 HGNCID:26784 Length:166 Species:Homo sapiens


Alignment Length:100 Identity:26/100 - (26%)
Similarity:49/100 - (49%) Gaps:10/100 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 EKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRL----- 297
            |.:|:.:..:..|.|||..|.|.:.|.:.|:|:|:.|:....||..:||:||.|.|:.::     
Human    57 ENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYN 121

  Fly   298 -----VQQQLESVEASKMATKKAQQGSLNRNEKIR 327
                 |.::.......|...||..:.:|.:.:.::
Human   122 GENSPVHKEKREAAKKKQERKKRAKETLEKKKLLK 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 prfA 35..378 CDD:234801 26/99 (26%)
PCRF 58..222 CDD:281461
RF-1 234..338 CDD:278876 26/99 (26%)
MTRFRNP_001137377.1 RF-1 53..>116 CDD:306878 21/58 (36%)
GGQ domain. /evidence=ECO:0000250|UniProtKB:Q80VP5 57..121 21/63 (33%)
GGQ. /evidence=ECO:0000269|PubMed:24198383 71..73 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..148 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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