Protein Alignment mRF1 and APG3

DIOPT Version :9

• Sequence 1: NP_609617.1
• Gene: mRF1 / 34720
• FlyBaseID: FBgn0032486
• Length: 392
• Species: Drosophila melanogaster
• Sequence 2: NP_191850.2
• Gene: APG3 / 825466
• AraportID: AT3G62910
• Length: 422
• Species: Arabidopsis thaliana
• Alignment Length: 394
• Identity: 123/394 - (31%)
• Similarity: 211/394 - (53%)
• Gaps: 47/394 - (11%)

  Fly     3 SRKLLNLRLGYLARRWASTDPLSIQNEKLQAYLESLRQEYYAVRVNAA-----GNSKSYARLAQ- 61
            :|:|:.:...||.|:                 :||:.:.:..:.|..|     .|...|.:|||
plant    46 TRRLVCMAEPYLIRK-----------------MESVEKTWKELSVKLADPDVVSNQSEYQKLAQS 93

  Fly    62 ---LEGVVSALEQRRVLERHITSAKDM--EAEKDEDMRELMREENEVYVDLLGKQDQAL---LQE 118
               |:.||:...:.:..|:.:..:|.:  ||..||||.|::..|    ::.|.|:.:.|   |:.
plant    94 MSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSE----INSLTKEIEELEKQLKV 154

  Fly   119 LLTLSDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHAS 183
            ||..||..:...::..:.||.||.||.::..:|..||..|.|...|::...:....:.||.:...
plant   155 LLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCV 219

  Fly   184 LMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADIQVHIAEKDLKIETKRA 248
            :.:.|...:..|:||:|||||||||.||..||:|||||::.::|...:::|.|..||:::.:.|:
plant   220 MEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARS 284

  Fly   249 SGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRL----VQQQLESVEASK 309
            .|||||:||..::|:.:.|.|:|:.:....||:|::|:..|.:.||::|    |::|.|.:...
plant   285 GGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNE- 348

  Fly   310 MATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQLSGLIEKLQLEHRRER 374
               :|:|.|:..|:|||||||:...|:||||::..  ..|..||.|.  |...::......::|.
plant   349 ---RKSQVGTGARSEKIRTYNYKDSRVTDHRLKMN--FALTTFLDGA--LEDAVQACAALEQKEL 406

  Fly   375 LKEL 378
            ::||
plant   407 MEEL 410

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mRF1	NP_609617.1	prfA	35..378	CDD:234801	116/360 (32%)
		PCRF	58..222	CDD:281461	59/172 (34%)
		RF-1	234..338	CDD:278876	39/107 (36%)
APG3	NP_191850.2	prfA	54..412	CDD:234801	121/386 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	102	1.000	Domainoid score	I2296
eggNOG	1	0.900	-	-		E1_COG0216
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H5905
Inparanoid	1	1.050	218	1.000	Inparanoid score	I1214
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1313171at2759
OrthoFinder	1	1.000	-	-		FOG0001423
OrthoInspector	1	1.000	-	-		otm3058
orthoMCL	1	0.900	-	-		OOG6_101033
Panther	1	1.100	-	-	O	PTHR43804
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X991
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.830