DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and AT2G47020

DIOPT Version :9

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001323992.1 Gene:AT2G47020 / 819316 AraportID:AT2G47020 Length:439 Species:Arabidopsis thaliana


Alignment Length:391 Identity:131/391 - (33%)
Similarity:210/391 - (53%) Gaps:42/391 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 STDPLSIQNEKL------QAYLESL-RQEYYAVRVNAAGNSKSYARLAQLEGVVSALEQRRVLER 77
            |.|.:.|.:::|      .|.|:.| .|..|:....:..|.:    |.:|...:..:...|..::
plant    49 SPDLIKIMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRANKE----LRKLRDSMLLINDLRAKQK 109

  Fly    78 HITSAKDM--EAEKDEDMRELMREENEVYVDLLGKQDQALLQELLTLSDDEEYPALIFGLNAGAG 140
            .|...|.:  |:..|:||.:|...|.:..|: ..|:.|.||.:.|...|:.:....|..:.||.|
plant   110 EIDGLKSLVSESSDDKDMLDLAVGELDEAVE-EEKRLQTLLLKSLLPKDEADERDCILEVRAGTG 173

  Fly   141 GQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRWLRYEAGVHRVQ 205
            |:||.|||.:::.||..|.:..||:::......:|:.|.:.||..:.|...:..|::|:|:||||
plant   174 GEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQ 238

  Fly   206 RVPATEKSGRMHTSTASITVIPRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPT 270
            |:|.||||||:|||..|:.::|:..::.|.:..:||:|:|.|:.|:||||.|||:|||||:||||
plant   239 RIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPT 303

  Fly   271 GLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVEASK-------------------------- 309
            |:.|..|.||||..||..|:|.|.:||.:.:...:::|:                          
plant   304 GMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQVHIKSTNLFLMFSVNLTLS 368

  Fly   310 MATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQLSGLIEKLQLEHRRER 374
            |:....|.||.:|:.:||||||.|.|:||||: |.|.|.:...:: |:.|...|:.|.|....:.
plant   369 MSKSHEQIGSGDRSGRIRTYNFPQGRVTDHRV-GITHHAIEDMMQ-GENLDMFIDALLLRQEMDA 431

  Fly   375 L 375
            :
plant   432 I 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 prfA 35..378 CDD:234801 126/370 (34%)
PCRF 58..222 CDD:281461 56/165 (34%)
RF-1 234..338 CDD:278876 51/129 (40%)
AT2G47020NP_001323992.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 111 1.000 Domainoid score I2086
eggNOG 1 0.900 - - E1_COG0216
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I1214
OMA 1 1.010 - - QHG62484
OrthoDB 1 1.010 - - D1313171at2759
OrthoFinder 1 1.000 - - FOG0001423
OrthoInspector 1 1.000 - - otm3058
orthoMCL 1 0.900 - - OOG6_101033
Panther 1 1.100 - - LDO PTHR43804
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X991
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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