DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and Mtrfr

DIOPT Version :10

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001128189.1 Gene:Mtrfr / 72650 MGIID:1919900 Length:184 Species:Mus musculus


Alignment Length:155 Identity:37/155 - (23%)
Similarity:68/155 - (43%) Gaps:26/155 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 RVQRVPATEKSGRMHTSTASI-------TVIPRPADIQVHIAEKDLKIETKRASGAGGQHVNTTD 260
            |:|..||....| |..||..:       .::|        :.|.:|:.:..:..|.|||..|.|.
Mouse    27 RLQEKPALLFPG-MAASTVQVAGRKDYPALLP--------LNESELEEQFVKGHGPGGQATNKTS 82

  Fly   261 SAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRL----------VQQQLESVEASKMATKKA 315
            :.|.:.|:|:|:.|:....||..:||::|.|.|:.::          |.::....|..|...||.
Mouse    83 NCVVLKHVPSGIVVKCHQTRSVDQNRKIARKVLQEKVDVFYNGENSPVHKEKLEAERRKRERKKR 147

  Fly   316 QQGSLNRNEKIRTYNFVQDRITDHR 340
            .:.:|.:.:.::........||:.:
Mouse   148 AKETLEKKKLLKELREASQNITEKK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 PrfA 35..378 CDD:439986 37/155 (24%)
MtrfrNP_001128189.1 RF-1 58..>119 CDD:459823 20/60 (33%)
GGQ domain. /evidence=ECO:0000269|PubMed:22821833 60..124 20/63 (32%)
GGQ. /evidence=ECO:0000269|PubMed:22821833 74..76 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..184 7/41 (17%)

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