DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and MTRF1L

DIOPT Version :9

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_061914.3 Gene:MTRF1L / 54516 HGNCID:21051 Length:380 Species:Homo sapiens


Alignment Length:375 Identity:161/375 - (42%)
Similarity:231/375 - (61%) Gaps:26/375 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ARRWAST-----DPLSIQNEKLQAYLESLRQEYYAVRVNAAGNSKSYARLAQLEGVVSALEQRRV 74
            |||..|:     :.|..:...|:.:||  ||        |...:....|..:|..|:..|.::  
Human    22 ARRPLSSGSPPLEELFTRGGPLRTFLE--RQ--------AGSEAHLKVRRPELLAVIKLLNEK-- 74

  Fly    75 LERHITSAKDMEAEKDEDMRELMREENEVYV---DLLGKQDQALLQELLTLSDDEEYPALIFGLN 136
             ||.:...:.:..:::||:|:|  .|||:.:   ::...:.|.:|  ||..|::.:...||..:.
Human    75 -ERELRETEHLLHDENEDLRKL--AENEITLCQKEITQLKHQIIL--LLVPSEETDENDLILEVT 134

  Fly   137 AGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRWLRYEAGV 201
            ||.||||||||..|:::||..|.....|.:|......:::|||||||..:.|.:|:|.:::|.||
Human   135 AGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGV 199

  Fly   202 HRVQRVPATEKSGRMHTSTASITVIPRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIV 266
            |||||||.|||.||:||||.::.::|:|.:|.:.|..|||:|:||||||||||||||||||||||
Human   200 HRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIV 264

  Fly   267 HLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNF 331
            |||||:..|.|.|||||||:||||.:||::|....||.....:...:|.|.||..|:||||||||
Human   265 HLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEEINKRQNARKIQIGSKGRSEKIRTYNF 329

  Fly   332 VQDRITDHRIQGGTLHNLNGFLKGGDQLSGLIEKLQLEHRRERLKELLDR 381
            .|:|:||||| ..|||:|..|::|...|..|::.|:.....|.|.|::.:
Human   330 PQNRVTDHRI-NKTLHDLETFMQGDYLLDELVQSLKEYADYESLVEIISQ 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 prfA 35..378 CDD:234801 154/345 (45%)
PCRF 58..222 CDD:281461 65/166 (39%)
RF-1 234..338 CDD:278876 65/103 (63%)
MTRF1LNP_061914.3 PCRF 63..221 CDD:281461 64/164 (39%)
PrfB 130..353 CDD:224107 124/223 (56%)
RF-1 231..336 CDD:278876 65/104 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4791
eggNOG 1 0.900 - - E1_COG0216
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5905
Inparanoid 1 1.050 275 1.000 Inparanoid score I2972
Isobase 1 0.950 - 0 Normalized mean entropy S1289
OMA 1 1.010 - - QHG62484
OrthoDB 1 1.010 - - D1313171at2759
OrthoFinder 1 1.000 - - FOG0001423
OrthoInspector 1 1.000 - - otm41346
orthoMCL 1 0.900 - - OOG6_101033
Panther 1 1.100 - - LDO PTHR43804
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1085
SonicParanoid 1 1.000 - - X991
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

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