DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and mtrf1

DIOPT Version :10

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001428886.1 Gene:mtrf1 / 503530 ZFINID:ZDB-GENE-050220-8 Length:403 Species:Danio rerio


Alignment Length:378 Identity:147/378 - (38%)
Similarity:214/378 - (56%) Gaps:35/378 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IQNEKLQAYLESLRQEYYAVRVNAAGNSKSYA-------RLAQLEGVVSALEQRRVLER------ 77
            :|::.|:..::....|:.||.......:.|.|       ||.....::.|.|:..:|.|      
Zfish    33 LQHDALRRLVKRAVDEHRAVSSRLESGAVSEADRRALNRRLLDASALMEAFEETELLLREMEDLQ 97

  Fly    78 ---HITSAKDMEAEKDEDMRELMREENEVYVDLLGKQDQAL---LQELLTLSDDEEYPALIFGLN 136
               |.|||      :|:.|..|:|:|:|.    ||::.:.|   |.|.|...||.:..::|..:.
Zfish    98 TLIHNTSA------EDQQMLSLLRDEHEE----LGRRVERLHKQLIETLVPPDDLDSRSVILEVV 152

  Fly   137 AG--AGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRWLRYEA 199
            :|  .||.....|.:|:::||.|:..:..|::|.|.....:.|||.|||:.||||..||||::|.
Zfish   153 SGRTTGGDICQQFTREMFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEG 217

  Fly   200 GVHRVQRVPATEKSGRM---HTSTASITVIPRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDS 261
            |.|||||:|....|.||   ||.|.::.|:|:..::.:.||.|||:|:|.|:.||||||||||||
Zfish   218 GTHRVQRIPEVGLSSRMQRIHTGTMTVIVLPQMEEVDIDIAPKDLRIDTFRSRGAGGQHVNTTDS 282

  Fly   262 AVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVEASKMATKKAQQGSLNRNEKI 326
            |||:||||||...|.|..||||||||.|::.||:||.|..:..........::.|.|:..::|:|
Zfish   283 AVRLVHLPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQREQTHTARRLQVGTRAQSERI 347

  Fly   327 RTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQLSGLIEKLQLEHRRERLKELL 379
            |||||.|||:||||| |....::..|::|.:.|..|:..||....||.|.:||
Zfish   348 RTYNFTQDRVTDHRI-GFVTRDIKEFMRGAEGLEDLLRLLQENQDREELLKLL 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 PrfA 35..378 CDD:439986 143/366 (39%)
mtrf1NP_001428886.1 None

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