DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and Mtrfr

DIOPT Version :10

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001102535.2 Gene:Mtrfr / 498179 RGDID:1563482 Length:181 Species:Rattus norvegicus


Alignment Length:151 Identity:37/151 - (24%)
Similarity:70/151 - (46%) Gaps:14/151 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 RVQRVPATEKSGRMHTSTASITVIPRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVH 267
            |::..||....|...|:.........||.:.::  |.:|:.:..:..|.|||..|.|.:.|.:.|
  Rat    24 RLREKPALLFPGMAATAMQVAGKKDYPALLPLN--ESELEEQFVKGHGPGGQATNKTSNCVVLKH 86

  Fly   268 LPTGLAVEAQSERSQLKNRELAMKRLR-----------SRLVQQQLESVEASKMATKKAQQGSLN 321
            :|:|:.|:....||..:||::|.|.|:           |.:.:::||. |..|...||..:.:|.
  Rat    87 VPSGIVVKCHQTRSVDQNRKMARKILQEKVDVFYNGENSPIHKEKLEG-ERRKREKKKRAKETLE 150

  Fly   322 RNEKIRTYNFVQDRITDHRIQ 342
            :.:.::........||:.:.:
  Rat   151 KKKLLKELWEASQNITEKKAE 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 PrfA 35..378 CDD:439986 37/151 (25%)
MtrfrNP_001102535.2 RF-1 55..>116 CDD:459823 20/62 (32%)

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