DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and mtrf1

DIOPT Version :10

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_002938091.2 Gene:mtrf1 / 100486280 XenbaseID:XB-GENE-991014 Length:444 Species:Xenopus tropicalis


Alignment Length:414 Identity:156/414 - (37%)
Similarity:221/414 - (53%) Gaps:69/414 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RLGYLARRWASTDPLSIQN-------EKLQAYLESLRQEYYAVRVNAAGNSKSYARLAQLEGVVS 67
            |||...||      ..:||       |..|.||:||              ||.:.||.::.|..|
 Frog    53 RLGDHPRR------SYLQNTCTLWECEIFQNYLQSL--------------SKEHERLTEMLGQTS 97

  Fly    68 ALEQRR--------VLERHITSAKDMEAEKDEDMREL------MREENEVYV------------- 105
            ..|..|        .|.|.|...:|:: |.::|:|||      .|||.::..             
 Frog    98 VREDDRRSASRRHSELSRLIGLLRDIK-ETEQDVRELELMCADNREEGQMLALALEEKNTLKQNI 161

  Fly   106 -DLLGKQDQALL-QELLTLSDDEEYPALIFGLNAG--AGGQEAMLFAQELYEMYTGYFEHMGWEW 166
             .|.||..|||| .|...::|      .:..:.:|  .||.....|.:|:::||..|..:..|.:
 Frog   162 NKLRGKLLQALLPHEKYDMND------AVLEVTSGRTTGGDICQQFTKEIFDMYQNYAYYKSWSF 220

  Fly   167 EEFASEGTDIGGLRHASLMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRM---HTSTASITVIPR 228
            |.......:.|||.||:..:|||..::.|:||.|.|||||:|....|.||   ||.|.::.|:|:
 Frog   221 EILNYSPAEYGGLHHAAARISGEGVYKRLKYEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIVLPQ 285

  Fly   229 PADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRL 293
            |.:::|.|..|||:|:|.|:.||||||||||||||||||:|||:|||.|.||||:.|:|.|::.|
 Frog   286 PDEVEVKIDSKDLRIDTFRSKGAGGQHVNTTDSAVRIVHIPTGIAVECQQERSQIANKEKALRIL 350

  Fly   294 RSRLVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQ 358
            |.||.:|.:|.....:.:.:|.|.|:..::|:||||||.|||:|||||. ..:.|:..||.|.:.
 Frog   351 RMRLYEQTVEQELLERRSARKLQVGTRAQSERIRTYNFTQDRLTDHRIH-YEVRNIKEFLNGEEL 414

  Fly   359 LSGLIEKLQLEHRRERLKELLDRW 382
            |..||:|||.....|.:.||::.:
 Frog   415 LDDLIQKLQESADTEAILELIENY 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 PrfA 35..378 CDD:439986 144/376 (38%)
mtrf1XP_002938091.2 PrfA 79..434 CDD:439986 144/376 (38%)

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