DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and mtrf1l

DIOPT Version :10

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_002936423.2 Gene:mtrf1l / 100380155 XenbaseID:XB-GENE-953961 Length:443 Species:Xenopus tropicalis


Alignment Length:333 Identity:157/333 - (47%)
Similarity:217/333 - (65%) Gaps:25/333 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AGNSKSYARLAQLEGVVSALEQRRVLERHITSAKDMEAEKDEDMRELMREENEVYVDL--LGKQD 112
            |.||......||.:...:|.:.||:|. .|...:..|.|:.| :::|:::|.|   ||  |...:
 Frog    96 ASNSAWCPAGAQGQQRRNAWDLRRLLS-PIQELRRKEQEQQE-LQQLLKDECE---DLKALASTE 155

  Fly   113 QALLQE-----------LLTLSDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEW 166
            .|..||           :|...::.|...||..:.||.||||||||..|:::||..|..|..|.:
 Frog   156 IASCQEEINHLKHKIASILIKREESEDNDLIMEVTAGVGGQEAMLFTAEMFDMYQHYAVHKNWSF 220

  Fly   167 ---EEFASEGTDIGGLRHASLMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPR 228
               |.|:||   :||||||::.:.|:||::.|::|.|||||||||.|||.||:||||.::.::|:
 Frog   221 DLLEYFSSE---LGGLRHATVSIGGQDAYKCLKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ 282

  Fly   229 PADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRL 293
            |::|.:.|..|||:|||||||||||||||||||||||||:|||:..|.|.||||:||:|.||:.|
 Frog   283 PSEINLVINPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVVSECQQERSQIKNKEKAMQVL 347

  Fly   294 RSRLVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQ 358
            |::|...:||...:.:...:|.|.|:..|:|||||||:.|||:||||| |.:|||:.|||.|.:.
 Frog   348 RAKLYTMKLEEETSKRYNARKIQIGTRGRSEKIRTYNYPQDRVTDHRI-GKSLHNIEGFLFGEEL 411

  Fly   359 LSGLIEKL 366
            |..||:.|
 Frog   412 LDDLIQSL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 PrfA 35..378 CDD:439986 157/333 (47%)
mtrf1lXP_002936423.2 PrfA 146..419 CDD:439986 141/279 (51%)

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