DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRF1 and mtrf1l

DIOPT Version :10

Sequence 1:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_002664272.1 Gene:mtrf1l / 100333733 ZFINID:ZDB-GENE-030131-8198 Length:431 Species:Danio rerio


Alignment Length:379 Identity:161/379 - (42%)
Similarity:230/379 - (60%) Gaps:30/379 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 STDPLSIQNEKLQAYLESLRQEYYAVRVNAAGNS--------------KSYARLAQLEGVVSALE 70
            |.|.: ...:..|.||:..:.||     |.:.||              .....:..|..:|..::
Zfish    60 SVDDI-FSKQSFQDYLKKKQTEY-----NTSLNSINSQNQTLEDADMKTQRTNMTILAHLVHNIK 118

  Fly    71 QRRVLERHITSAKDMEAEKDEDMRELMREENE-VYVDLLGKQDQALLQELLTL---SDDEEYPAL 131
            :..|.::.:...:|:..:.|.::.||...|.| |..|:     |.|.|::|:|   .::.:...|
Zfish   119 KLEVKQKEMEDMQDLLKDNDPELLELAETEKEAVLADI-----QDLRQKILSLLIPEEESDMSEL 178

  Fly   132 IFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRWLR 196
            :..::||.||||||||..|::|||..|....||.::...:..:::||:||||..|||..:::.|:
Zfish   179 VLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSGPLSYKKLK 243

  Fly   197 YEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDS 261
            :|||||||||||.||..||.||||.::.::|:|.:|...|..|||||||||||||||||||||||
Zfish   244 FEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTEISFTINPKDLKIETKRASGAGGQHVNTTDS 308

  Fly   262 AVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVEASKMATKKAQQGSLNRNEKI 326
            ||||.|||||...|.|.||||:||::.|||.||::|...:||...:.:...:|.|.|:..|:|||
Zfish   309 AVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLEEETSRRYQARKLQIGTRGRSEKI 373

  Fly   327 RTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQLSGLIEKLQLEHRRERLKELLD 380
            |||||.||||||||| |.|:|:::|||:|.:.|..:|..||....:|.|.::||
Zfish   374 RTYNFQQDRITDHRI-GKTVHDVHGFLQGEELLEEMIVFLQQFSEQESLMDVLD 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRF1NP_609617.1 PrfA 35..378 CDD:439986 155/360 (43%)
mtrf1lXP_002664272.1 PrfA 110..421 CDD:439986 148/316 (47%)

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