DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and AT1G67480

DIOPT Version :10

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_176915.1 Gene:AT1G67480 / 843069 AraportID:AT1G67480 Length:376 Species:Arabidopsis thaliana


Alignment Length:275 Identity:66/275 - (24%)
Similarity:115/275 - (41%) Gaps:62/275 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 LVPVKVIDKALKDDCRDMSVKIALR-------SICRD----IASKRGQLVPLRVCPRQLA---KK 328
            |:|      .|.||.....:.:..|       |:|:.    :.||.      .:..|:||   ::
plant    39 LIP------GLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKE------FITVRRLAGMLEE 91

  Fly   329 NIYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVGRILPG-------VSALNGKI 386
            .:|::..:.......|...||:.:.::..          .||      ||       |..::||:
plant    92 WLYVLTMNAGGKDNRWEVMDCLGQKLSSL----------PPM------PGPAKTGFKVVVVDGKL 140

  Fly   387 YVVGG---ERGSQILANGEV--YDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGG-WIGDDIG 445
            .|:.|   ..|| ::|:.:|  ||...:.|..:|.:.|.|.:|....:.|:::.||| .:..:..
plant   141 LVIAGCCMINGS-LVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESL 204

  Fly   446 GSMECYDPEQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGGCTTTTRHLPDLIS-FNPVTKEW--- 506
            .|.|.||||...|..:.|:.:||:.....:|.|.:|::||.:..|.....|:. :|.....|   
plant   205 SSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYVMGGRSNFTIGNSKLLDVYNTQCGSWHGS 269

  Fly   507 -NELARMQTARCQMG 520
             |.|. |.||..::|
plant   270 KNGLT-MVTAHVEVG 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB_POZ_KLHL27_IPP 63..189 CDD:349565
PHA03098 78..558 CDD:222983 66/275 (24%)
KELCH repeat 374..417 CDD:276965 15/54 (28%)
KELCH repeat 421..465 CDD:276965 14/44 (32%)
KELCH repeat 468..512 CDD:276965 12/48 (25%)
KELCH repeat 516..561 CDD:276965 1/5 (20%)
KELCH repeat 564..617 CDD:276965
Kelch 575..627 CDD:128874
AT1G67480NP_176915.1 F-box_AtAFR-like 39..83 CDD:438923 10/55 (18%)
NanM 93..341 CDD:442289 53/209 (25%)
KELCH repeat 130..175 CDD:276965 13/45 (29%)
KELCH repeat 179..224 CDD:276965 14/44 (32%)
KELCH repeat 227..267 CDD:276965 9/39 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.