DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9426 and AT1G55270

DIOPT Version :10

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_564684.1 Gene:AT1G55270 / 841972 AraportID:AT1G55270 Length:434 Species:Arabidopsis thaliana


Alignment Length:268 Identity:71/268 - (26%)
Similarity:111/268 - (41%) Gaps:60/268 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 IYVVGGERGSQILANGEVYDPQNDVWQPIAPMIVPR-----CEFGLCTMGG-NLFAVGGWIGDDI 444
            :||...:|..:|..|  .:||.:.:|||:.|  |||     ..||...:.| :|:..||  .|.:
plant   132 VYVFKRDRDGKISWN--TFDPISQLWQPLPP--VPREYSEAVGFGCAVLSGCHLYLFGG--KDPL 190

  Fly   445 GGSME---CYDPEQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGG-CTTTTRHLPDLISFNPVTKE 505
            .|||.   .|:...:.|.....|.:.|...|.......:|:.|| |....|.|.....::|....
plant   191 RGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEVYDPNKNR 255

  Fly   506 WNELARMQTARCQMGVAVLDRYLYVVGGSSISQDILSSVERYSFDEDKWTTVCALNVPRAIPAVV 570
            |:.:|.|.||...:...|.|:..::.|..| .|.::|  |.|..:.:.|:.|             
plant   256 WSFIADMSTAMVPLIGVVYDKKWFLKGLGS-HQLVMS--EAYDPEVNSWSPV------------- 304

  Fly   571 AADGLLYVAGGDQPCEVNFYRAQVTIN----AVEC--------YDPLSDTWKNCPD----LPVSR 619
             :||:  |||...||        .::|    .::|        :|..:|:|....|    |..|:
plant   305 -SDGM--VAGWRNPC--------TSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSKAHLGNSK 358

  Fly   620 S-EAGAVV 626
            | ||.|:|
plant   359 SLEAAALV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB_POZ_KLHL27_IPP 63..189 CDD:349565
PHA03098 78..558 CDD:222983 50/181 (28%)
KELCH repeat 374..417 CDD:276965 10/30 (33%)
KELCH repeat 421..465 CDD:276965 13/52 (25%)
KELCH repeat 468..512 CDD:276965 11/44 (25%)
KELCH repeat 516..561 CDD:276965 10/44 (23%)
KELCH repeat 564..617 CDD:276965 14/68 (21%)
Kelch 575..627 CDD:128874 18/69 (26%)
AT1G55270NP_564684.1 F-box_AtAFR-like 78..122 CDD:438923
NanM 155..>324 CDD:442289 52/199 (26%)
KELCH repeat 170..213 CDD:276965 12/44 (27%)
KELCH repeat 217..263 CDD:276965 11/45 (24%)
KELCH repeat 266..306 CDD:276965 10/56 (18%)
Blue background indicates that the domain is not in the aligned region.

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