DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and AT1G19470

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_173379.1 Gene:AT1G19470 / 838531 AraportID:AT1G19470 Length:412 Species:Arabidopsis thaliana


Alignment Length:236 Identity:51/236 - (21%)
Similarity:80/236 - (33%) Gaps:72/236 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 GQLVPLR-VCPRQLAKKNIYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVGRIL 376
            |.|.|:. .|......:.:|:|||. .|..|        .:.:...|....:......|:.||..
plant   139 GSLPPVPWGCSVVTVGQEMYVIGGL-LDIRR--------LQLMTLIDCRTHKCRSLPSMKRGRYK 194

  Fly   377 PGVSALNGKIYVVGGERGSQILANG-EVYDPQNDVWQPIAPMIVPRCEFG------------LCT 428
            .....::|||||:||.|..:..|.. ||:|.:..:|:.: |...||...|            |..
plant   195 AAAGVVDGKIYVIGGFRMRKPDAEWIEVFDLKTQIWESL-PGPYPRTSAGSQFSAHAVMEDKLYM 258

  Fly   429 MGGNLFAV------GGW------------------IGDD----------IGGSMECYDPEQDLWK 459
            :|.....|      |.|                  :.||          :|..:..|.|:...|:
plant   259 LGSKFCLVYEPKRNGEWDASVGATPLKDLWDKTCCVVDDMLYTTDPRRTLGHPIVVYHPKDKTWR 323

  Fly   460 -----LMGSMPQPRFSMG-VVSFEGLI--------YIVGGC 486
                 .:.|:|...||.. :.:|.|.:        |:.|.|
plant   324 PVKGESLWSLPSYFFSKSEMANFGGKLVILGSNKSYVTGDC 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045
PHA03098 78..558 CDD:222983 51/236 (22%)
BACK 187..289 CDD:285009
Kelch 330..384 CDD:128874 10/53 (19%)
KELCH repeat 374..417 CDD:276965 14/43 (33%)
Kelch 385..431 CDD:128874 17/58 (29%)
KELCH repeat 421..465 CDD:276965 14/94 (15%)
Kelch <447..478 CDD:128874 8/36 (22%)
Kelch_6 467..516 CDD:290672 7/29 (24%)
KELCH repeat 468..512 CDD:276965 7/28 (25%)
Kelch_1 515..557 CDD:279660
KELCH repeat 516..561 CDD:276965
KELCH repeat 564..617 CDD:276965
Kelch 575..627 CDD:128874
AT1G19470NP_173379.1 mutarot_permut 123..>362 CDD:274642 49/232 (21%)
PHA03098 <147..260 CDD:222983 29/122 (24%)
KELCH repeat 147..188 CDD:276965 8/49 (16%)
KELCH repeat 192..236 CDD:276965 15/44 (34%)
Kelch_1 192..234 CDD:366584 14/42 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.