DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and AT1G19460

DIOPT Version :10

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_173378.1 Gene:AT1G19460 / 838530 AraportID:AT1G19460 Length:416 Species:Arabidopsis thaliana


Alignment Length:299 Identity:62/299 - (20%)
Similarity:99/299 - (33%) Gaps:95/299 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 SKRGQLVPLRV-CPRQLAKKNIYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVG 373
            ||...|.|:.. |......:.:|:|||. .|..|        .:.:...|....:......|:.|
plant   136 SKLESLPPVPYGCSVVTIGQEMYVIGGL-LDVRR--------LQLMTLIDCRTHKCRSLPKMKRG 191

  Fly   374 RILPGVSALNGKIYVVGGERGSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGG 438
            |........:|||||:||.|                       |..|..|               
plant   192 RYHAAAGVFDGKIYVIGGFR-----------------------MRKPDAE--------------- 218

  Fly   439 WIGDDIGGSMECYDPEQDLWKLMGSMPQPRFSMGVVSF-----EGLIYIVGG-CTTTTRHLPD-- 495
            ||        |.:|.::.:|:.:.. |.|:.||....|     |..:||:|. |..   :.|.  
plant   219 WI--------EVFDLKKQIWESLPG-PYPKTSMDSQFFAHAVMEDKLYILGSRCLI---YEPKRN 271

  Fly   496 -----LISFNPVTKEWNELARMQTARCQMGVAVLDRYLYVVGGS-SISQDILSSVERYSFDEDKW 554
                 .::.||:...|.....||        .|:|..||.:... ::...|:.    |:..:..|
plant   272 GEWDATVNANPIWNLWKVPCTMQ--------CVIDDMLYTIDPQCTLGHPIVV----YNPKDKTW 324

  Fly   555 TTVCALNVPRAIPAVVAAD--------GLLYVAGGDQPC 585
            ..|...:: |.:|:...:|        |.|.:.|.:..|
plant   325 RPVKGESL-RTLPSYFVSDGSEMANFGGKLVILGSNGSC 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB_POZ_KLHL27_IPP 63..189 CDD:349565
PHA03098 78..558 CDD:222983 54/262 (21%)
KELCH repeat 374..417 CDD:276965 9/42 (21%)
KELCH repeat 421..465 CDD:276965 6/43 (14%)
KELCH repeat 468..512 CDD:276965 12/56 (21%)
KELCH repeat 516..561 CDD:276965 8/45 (18%)
KELCH repeat 564..617 CDD:276965 7/30 (23%)
Kelch 575..627 CDD:128874 3/11 (27%)
AT1G19460NP_173378.1 F-box_SF 57..98 CDD:459239
NanM 136..357 CDD:442289 60/292 (21%)
KELCH repeat 146..188 CDD:276965 8/50 (16%)
KELCH repeat 192..243 CDD:276965 20/97 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.