DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and AT5G49000

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001119398.1 Gene:AT5G49000 / 834959 AraportID:AT5G49000 Length:372 Species:Arabidopsis thaliana


Alignment Length:279 Identity:61/279 - (21%)
Similarity:101/279 - (36%) Gaps:74/279 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 NIYIIGGSHRDTPRTWNS-ADCIFETVAKFDIFRREWTETAPMEVGRILPGVSALNGKIYVVGGE 392
            |||.||||..:.|.:..| .||...|          |.|...|.:.|..|..:.::|||||.||.
plant   131 NIYAIGGSIENAPSSKVSILDCRSHT----------WHEAPSMRMKRNYPAANVVDGKIYVAGGL 185

  Fly   393 RGSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGGWIGDDIGGSMECYDPEQDL 457
            .........||:|.:...|:.:...:..|..:....:.|.::.        .|..:..|.|::|.
plant   186 EEFDSSKWMEVFDIKTQTWEFVLSPLAERFIYRSLVIEGEIYI--------FGDKVVTYKPKEDR 242

  Fly   458 WKLMG---SMPQPRFSMGVVSFEGLIYIVGGCTTTTRHLPDLISFNPVTKEWNE----------- 508
            |..:|   ||....|.......:.::|    |            :.|...:|.|           
plant   243 WGGVGEHQSMDLGLFFHSYCVIDNVLY----C------------YRPGGIKWYESEKRSWRKLRG 291

  Fly   509 ---LARMQTARCQMG-----VAVL-DRYLYVVGGSSIS-------------QDILSSVERYSFDE 551
               |:::.::..::.     :|:| |:|:...|..|.|             |.|...||.:   :
plant   292 LKGLSKLASSCVKLADYGGKMALLWDKYIPCSGNKSHSISCAVVSLERCKNQGIRGKVEWF---D 353

  Fly   552 DKWTTVCALNVPRAIPAVV 570
            |..|...:.|...|:.|.:
plant   354 DMLTVPSSYNFVGALAATL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045
PHA03098 78..558 CDD:222983 58/265 (22%)
BACK 187..289 CDD:285009
Kelch 330..384 CDD:128874 16/54 (30%)
KELCH repeat 374..417 CDD:276965 13/42 (31%)
Kelch 385..431 CDD:128874 11/45 (24%)
KELCH repeat 421..465 CDD:276965 9/46 (20%)
Kelch <447..478 CDD:128874 8/33 (24%)
Kelch_6 467..516 CDD:290672 7/62 (11%)
KELCH repeat 468..512 CDD:276965 7/57 (12%)
Kelch_1 515..557 CDD:279660 13/60 (22%)
KELCH repeat 516..561 CDD:276965 13/63 (21%)
KELCH repeat 564..617 CDD:276965 2/7 (29%)
Kelch 575..627 CDD:128874
AT5G49000NP_001119398.1 F-box 24..66 CDD:279040
KELCH repeat 121..163 CDD:276965 14/41 (34%)
Kelch 132..177 CDD:128874 16/54 (30%)
KELCH repeat 167..212 CDD:276965 13/44 (30%)
Kelch_1 167..207 CDD:279660 13/39 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.