DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and AT5G03020

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_195922.1 Gene:AT5G03020 / 831706 AraportID:AT5G03020 Length:347 Species:Arabidopsis thaliana


Alignment Length:234 Identity:60/234 - (25%)
Similarity:86/234 - (36%) Gaps:78/234 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 IYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVGRILPGVSALNGKIYVVGGERG 394
            ||||||..|  .|..|       .|:.||....:|.....|...|:.|..|.::|||||:||.||
plant   120 IYIIGGFVR--RRRSN-------RVSIFDYRTYQWRRLPKMRQPRVYPAASVIDGKIYVIGGFRG 175

  Fly   395 S---QILANGEVYDPQNDVWQPI----------------------APMIVPR------------- 421
            |   .|..:||||||:.:.|:||                      |.:::.:             
plant   176 SMPTDIENSGEVYDPKTNTWEPILLTSLDLTVQNVFKKKHYFTTKACLVINKVSCLLYVSDGKLY 240

  Fly   422 ---------CE--FGLCTMGGNLFAV------GG-----WIGDDIGGSMECY---DPEQDLWKLM 461
                     |.  :||.....|||.|      ||     |.....|...:|.   :.|..:|...
plant   241 WREDKEGFECRKVYGLAEQSSNLFRVVANSGGGGRVTVWWKSMTKGCEFDCLLTEECETKIWCAE 305

  Fly   462 GSMPQP--RFSMGVVSFEGLIYIVGGCTTTTRHLPDLIS 498
            .|:.:.  |...|.|.:...::.:..|.    ::.|.||
plant   306 ISLERRGLRELRGFVEWSKEVFTIDRCD----YIYDFIS 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045
PHA03098 78..558 CDD:222983 60/234 (26%)
BACK 187..289 CDD:285009
Kelch 330..384 CDD:128874 17/53 (32%)
KELCH repeat 374..417 CDD:276965 24/67 (36%)
Kelch 385..431 CDD:128874 23/94 (24%)
KELCH repeat 421..465 CDD:276965 15/81 (19%)
Kelch <447..478 CDD:128874 7/35 (20%)
Kelch_6 467..516 CDD:290672 7/34 (21%)
KELCH repeat 468..512 CDD:276965 7/31 (23%)
Kelch_1 515..557 CDD:279660
KELCH repeat 516..561 CDD:276965
KELCH repeat 564..617 CDD:276965
Kelch 575..627 CDD:128874
AT5G03020NP_195922.1 KELCH repeat 110..151 CDD:276965 13/39 (33%)
Kelch 119..165 CDD:128874 17/53 (32%)
Kelch_1 154..198 CDD:279660 21/43 (49%)
KELCH repeat 155..198 CDD:276965 21/42 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.