DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9426 and AT4G39580

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_195668.1 Gene:AT4G39580 / 830112 AraportID:AT4G39580 Length:375 Species:Arabidopsis thaliana


Alignment Length:139 Identity:43/139 - (30%)
Similarity:58/139 - (41%) Gaps:23/139 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 NIYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVGRILPGVSALNGKIYVVGGER 393
            |||.|||...|.|.:         :|:..|....:|.|...|.|.|..|..:.|:|||||.||..
plant   132 NIYAIGGPINDAPSS---------SVSVLDCQCEKWREAPSMRVARNYPTATVLDGKIYVAGGCE 187

  Fly   394 GSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGG-----NLFAVGGWIGDDIGGSMECYDP 453
            ....|...||:||:...|..:|.....|||..:....|     :||...|.:         .|||
plant   188 DCTSLDCIEVFDPKTQTWDSVASPGTERCERLVYKSVGIEGKYHLFGGAGHV---------AYDP 243

  Fly   454 EQDLWKLMG 462
            ::..|..:|
plant   244 KEGRWDSVG 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045
PHA03098 78..558 CDD:222983 43/139 (31%)
BACK 187..289 CDD:285009
Kelch 330..384 CDD:128874 16/53 (30%)
KELCH repeat 374..417 CDD:276965 17/42 (40%)
Kelch 385..431 CDD:128874 16/45 (36%)
KELCH repeat 421..465 CDD:276965 12/47 (26%)
Kelch <447..478 CDD:128874 5/16 (31%)
Kelch_6 467..516 CDD:290672
KELCH repeat 468..512 CDD:276965
Kelch_1 515..557 CDD:279660
KELCH repeat 516..561 CDD:276965
KELCH repeat 564..617 CDD:276965
Kelch 575..627 CDD:128874
AT4G39580NP_195668.1 F-box 26..65 CDD:395521
PHA03098 <125..300 CDD:222983 43/139 (31%)
KELCH repeat 125..164 CDD:276965 12/40 (30%)
KELCH repeat 168..212 CDD:276965 17/43 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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