DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9426 and AT4G39580

DIOPT Version :10

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_195668.1 Gene:AT4G39580 / 830112 AraportID:AT4G39580 Length:375 Species:Arabidopsis thaliana


Alignment Length:139 Identity:43/139 - (30%)
Similarity:58/139 - (41%) Gaps:23/139 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 NIYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVGRILPGVSALNGKIYVVGGER 393
            |||.|||...|.|.:         :|:..|....:|.|...|.|.|..|..:.|:|||||.||..
plant   132 NIYAIGGPINDAPSS---------SVSVLDCQCEKWREAPSMRVARNYPTATVLDGKIYVAGGCE 187

  Fly   394 GSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGG-----NLFAVGGWIGDDIGGSMECYDP 453
            ....|...||:||:...|..:|.....|||..:....|     :||...|.:         .|||
plant   188 DCTSLDCIEVFDPKTQTWDSVASPGTERCERLVYKSVGIEGKYHLFGGAGHV---------AYDP 243

  Fly   454 EQDLWKLMG 462
            ::..|..:|
plant   244 KEGRWDSVG 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB_POZ_KLHL27_IPP 63..189 CDD:349565
PHA03098 78..558 CDD:222983 43/139 (31%)
KELCH repeat 374..417 CDD:276965 17/42 (40%)
KELCH repeat 421..465 CDD:276965 12/47 (26%)
KELCH repeat 468..512 CDD:276965
KELCH repeat 516..561 CDD:276965
KELCH repeat 564..617 CDD:276965
Kelch 575..627 CDD:128874
AT4G39580NP_195668.1 F-box_AtAFR-like 26..66 CDD:438923
NanM 124..>269 CDD:442289 43/139 (31%)
KELCH repeat 125..164 CDD:276965 12/40 (30%)
KELCH repeat 168..212 CDD:276965 17/43 (40%)
Blue background indicates that the domain is not in the aligned region.

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