DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9426 and AT4G11770

DIOPT Version :9

Sequence 1:	NP_609616.1	Gene:	CG9426 / 34719	FlyBaseID:	FBgn0032485	Length:	627	Species:	Drosophila melanogaster
Sequence 2:	NP_192914.1	Gene:	AT4G11770 / 826783	AraportID:	AT4G11770	Length:	396	Species:	Arabidopsis thaliana

Alignment Length:	354	Identity:	78/354 - (22%)
Similarity:	130/354 - (36%)	Gaps:	99/354 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   245 ESQVFQAALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVIDKALKDDCRDMSVKIALRSI-CRDI 308
            :|:.|.:..|.|..::|:........||...|..:|.       .:||       .|..: |..|
plant    98 KSRWFTSCFRPILTNLTRATSKEEKKLSENLMVSIPT-------SNDC-------PLSGLTCNTI 148

  Fly   309 ASKRGQLVPLRVCPRQLAKKNIYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVG 373
            .|                  .||:|||.....         :...|...|.....|.|...|:|.
plant   149 GS------------------YIYMIGGYINGV---------LSSRVFFLDCRSHTWHEAPSMQVA 186

  Fly   374 RILPGVSALNGKIYVVGGERGSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGG 438
            |..|.|:.|:||||||.|.|||......|::||:...|:.:..   |..|     |.|...:.|.
plant   187 RKSPLVNVLDGKIYVVEGWRGSDYSNLIEIFDPKTQKWEHVPS---PSAE-----MRGRYISKGL 243

  Fly   439 WIGDDI---GGSMECYDPEQDLWKLMGSMPQPRFSMG--VVSF------EGLIYIVGGCTTTTRH 492
            ...:.:   |.....|.|::..|..:|      |.|.  :||:      :.:.|:|        .
plant   244 VYEEKLYLFGDKNVVYKPKESRWDALG------FDMNLWLVSYGSSCVIDNVCYMV--------F 294

  Fly   493 LPDLISFNPVTKEW------NELARMQTARCQM-------GVAVL-DRYLYVVGG-------SSI 536
            ...||.::...:.|      .:|.:::..|..:       .:|:| ::.:.|||.       :.|
plant   295 YKRLIWYDSEVRYWRVLKGLEKLPKLRHRRSCIRMVDYGGKIAILWEKKVRVVGSDKKMIWCTEI 359

  Fly   537 SQDILSSVERYSFDEDKWTTVCALNVPRA 565
            :.:..|:.:.|.  :.:|..| .|.||::
plant   360 ALERRSAHKIYG--KIEWCDV-VLTVPKS 385

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9426	NP_609616.1	BTB	73..179	CDD:279045
		PHA03098	78..558	CDD:222983	74/345 (21%)
		BACK	187..289	CDD:285009	9/43 (21%)
		Kelch	330..384	CDD:128874	15/53 (28%)
		KELCH repeat	374..417	CDD:276965	18/42 (43%)
		Kelch	385..431	CDD:128874	16/45 (36%)
		KELCH repeat	421..465	CDD:276965	9/46 (20%)
		Kelch	<447..478	CDD:128874	8/38 (21%)
		Kelch_6	467..516	CDD:290672	10/62 (16%)
		KELCH repeat	468..512	CDD:276965	10/57 (18%)
		Kelch_1	515..557	CDD:279660	10/56 (18%)
		KELCH repeat	516..561	CDD:276965	11/59 (19%)
		KELCH repeat	564..617	CDD:276965	0/2 (0%)
		Kelch	575..627	CDD:128874
AT4G11770	NP_192914.1	F-box	15..55	CDD:279040
		KELCH repeat	141..183	CDD:276965	12/68 (18%)
		Kelch	152..197	CDD:128874	15/53 (28%)
		Kelch_1	186..231	CDD:279660	18/47 (38%)
		KELCH repeat	187..234	CDD:276965	20/54 (37%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X9
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910