DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and NSP2

DIOPT Version :10

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001189663.1 Gene:NSP2 / 817869 AraportID:AT2G33070 Length:473 Species:Arabidopsis thaliana


Alignment Length:315 Identity:72/315 - (22%)
Similarity:122/315 - (38%) Gaps:64/315 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 FDIFRREWTETAPMEV--GRILPGVSALNGKIYVV-GGE------RGSQILANGEVYDPQNDVWQ 412
            |.:..:|...|...:.  |:..|....::|..:|: ||:      |.:.:|.:...|     :..
plant    85 FGVTTKEIISTLTFKTYKGKTSPPFGIVSGTKFVLQGGKIVGFHGRSTDVLHSLGAY-----ISS 144

  Fly   413 PIAP--------MIV--------PRCEFGLCTMGGNLFAVGGWI--GDDIGGSMECYDPEQDLWK 459
            |..|        ::|        |||...:..:|..:|:.||.:  ...|...:..:|.|...|.
plant   145 PATPKLRGKWIKVVVEQKGEGPGPRCSHDIAQVGNKIFSFGGELTPNQPIDKHLYVFDLETRTWS 209

  Fly   460 L---MGSMPQPRFSMGV--VSFEGLIYIVGGCTTTTRHLPDLISFNPVTKEWNELARMQ---TAR 516
            :   .|.:|. ...:||  ||....:|:.|| ...:|......||:....||..|..::   |.|
plant   210 ISPATGDVPN-LSCLGVRMVSIGSSLYVFGG-RDASRKYNGFYSFDTTKNEWKLLTPVEQGPTPR 272

  Fly   517 CQMGVAVLDRYLYVVGGSSISQDILSSVERYSFDEDKWTTV------CALNVPRAIPAVVAADGL 575
            ....:...:..:||.||.|.:.. |.:::.|:..:.||...      |::   |....:....|.
plant   273 SFHSMTADENNVYVFGGVSATVR-LKTLDAYNIVDHKWVQCSTPGGSCSV---RGGAGLEVVQGK 333

  Fly   576 LYVAGGDQPCEVNFYRAQVTINAVECYDPLSDTW---KNCPDLPVSRSEAGAVVV 627
            ::|..|...|||         :.|.||||..|.|   :...:.|.:||...:.||
plant   334 VWVVYGFNGCEV---------DDVHCYDPAQDKWTQVETFGEKPCARSVFASAVV 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB_POZ_KLHL27_IPP 63..189 CDD:349565
PHA03098 78..558 CDD:222983 52/241 (22%)
KELCH repeat 374..417 CDD:276965 10/57 (18%)
KELCH repeat 421..465 CDD:276965 11/48 (23%)
KELCH repeat 468..512 CDD:276965 13/45 (29%)
KELCH repeat 516..561 CDD:276965 11/50 (22%)
KELCH repeat 564..617 CDD:276965 14/55 (25%)
Kelch 575..627 CDD:128874 15/54 (28%)
NSP2NP_001189663.1 PLN02193 1..473 CDD:177844 72/315 (23%)
KELCH repeat 169..220 CDD:276965 12/51 (24%)
KELCH repeat 224..269 CDD:276965 13/45 (29%)
KELCH repeat 272..313 CDD:276965 10/41 (24%)
KELCH repeat 322..368 CDD:276965 14/54 (26%)
KELCH repeat 371..420 CDD:276965 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.