DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9426 and AT2G20380

DIOPT Version :9

Sequence 1:	NP_609616.1	Gene:	CG9426 / 34719	FlyBaseID:	FBgn0032485	Length:	627	Species:	Drosophila melanogaster
Sequence 2:	NP_179628.1	Gene:	AT2G20380 / 816557	AraportID:	AT2G20380	Length:	348	Species:	Arabidopsis thaliana

Alignment Length:	163	Identity:	35/163 - (21%)
Similarity:	67/163 - (41%)	Gaps:	38/163 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   414 IAPMI-VPRCEF-GLCTMGGNLFAVGGWIGDDIGGSMEC---YDPEQDLWKLMGSMPQP--RFSM 471
            :||:: .|..|| .|..:|..|:|....|.:....|:.|   |:.:...|     :|.|  :...
plant   107 LAPILNSPPVEFPSLIAVGSYLYAFRAAIEEGTSDSLNCVEVYNTDTQTW-----IPVPPNKRIF 166

  Fly   472 GVVSFEGLIYIVGGCTTTTRHLPDLISFNPVTKEWNELA----RMQTARCQMGVAVLDRYL--YV 530
            .:...:|::|:         .:..|:||  |.::..|||    ::::......||...:..  |.
plant   167 KLQHMKGMLYM---------KVSKLLSF--VAQDAEELAPLFPKLRSLLSTEVVAFKPKVSEGYE 220

  Fly   531 VGGSSISQDI----LSSVERYSFDED-----KW 554
            |.|.|::.|:    ...:|..::..|     :|
plant   221 VLGFSVNTDLGRGSFCMIEEITYHYDPSVKFRW 253

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9426	NP_609616.1	BTB	73..179	CDD:279045
		PHA03098	78..558	CDD:222983	35/163 (21%)
		BACK	187..289	CDD:285009
		Kelch	330..384	CDD:128874
		KELCH repeat	374..417	CDD:276965	1/2 (50%)
		Kelch	385..431	CDD:128874	6/18 (33%)
		KELCH repeat	421..465	CDD:276965	11/47 (23%)
		Kelch	<447..478	CDD:128874	6/35 (17%)
		Kelch_6	467..516	CDD:290672	10/54 (19%)
		KELCH repeat	468..512	CDD:276965	9/47 (19%)
		Kelch_1	515..557	CDD:279660	10/51 (20%)
		KELCH repeat	516..561	CDD:276965	10/50 (20%)
		KELCH repeat	564..617	CDD:276965
		Kelch	575..627	CDD:128874
AT2G20380	NP_179628.1	F-box	19..62	CDD:279040
		Kelch_6	118..161	CDD:290672	11/47 (23%)
		KELCH repeat	120..161	CDD:276965	10/45 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X9
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910