DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and Klhl28

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_079983.1 Gene:Klhl28 / 66689 MGIID:1913939 Length:571 Species:Mus musculus


Alignment Length:603 Identity:174/603 - (28%)
Similarity:274/603 - (45%) Gaps:113/603 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PSYCNAQ----YPFKVLSNLNQLREQSRFCDVEIIAGMATLSAHRAVLSAASAYFEAMFRPELGL 118
            |:|..|.    :..::|..||.||:....||:.:..|...:.||:.||::.|.||:|||..  .|
Mouse     6 PTYMLANLTHLHSEQLLQGLNLLRQHHELCDIILRVGDVKIHAHKVVLASISPYFKAMFTG--NL 68

  Fly   119 NEVKQKSVVLHTIDGDILHILLDFIYTGRCEITQSNVQELLAAADMLQLNEVVDGCCEFLCRELH 183
            :|.:...|....||...|..::::.|||...|:|..|:.||.||::||:..|:..||.||..:|.
Mouse    69 SEKENSEVEFQCIDEAALQAIVEYAYTGTVFISQDTVESLLPAANLLQIKLVLKECCAFLESQLD 133

  Fly   184 ASNALGILRFAEAHNCESLAKSALNFVHANFPAVTLEDEFLETPQTLLSQLLNSELLRVDSESQV 248
            ..|.:||.||||.:.|..|..:|..|:..||.:|...:||.|.....|.::::::.|.|.:|..|
Mouse   134 PGNCIGISRFAETYGCHDLYLAATKFICQNFESVCQTEEFFELTHADLDEIVSNDCLNVATEETV 198

  Fly   249 FQAALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVIDK------ALKDD--CRDM---------- 295
            |.|...|||:||.:|:.|:..:|:.||:.|:.||.:.:      .::||  |:.:          
Mouse   199 FYALESWIKYDVQERQKYLAQLLNSVRLPLLSVKFLTRLYEANHLIRDDRTCKHLLNEALKYHFM 263

  Fly   296 -------------SVKIALRSICRDIASKRG-------------------QLVPLRVCPRQ---- 324
                         ..:.|.:.:|. :..|.|                   .|.||.: ||.    
Mouse   264 PEHRLSHQTVLMTRPRCAPKVLCA-VGGKSGLFACLDSVEMYFPQNDSWIGLAPLNI-PRYEFGI 326

  Fly   325 -LAKKNIYIIGG------------SHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVGRIL 376
             :..:.:::|||            .|.::...||.     :|        ..||....|...|..
Mouse   327 CVLDQKVFVIGGIETSVRPGMTVRKHENSVECWNP-----DT--------NTWTSLERMNESRST 378

  Fly   377 PGVSALNGKIYVVGGERGSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGGWIG 441
            .||:.|.|:::.:||..|...|.:.|.|.|:...|||:|||...|..|....:.|.|:|:||: |
Mouse   379 LGVAVLAGEVFALGGYDGQSYLQSVEKYIPKIRQWQPVAPMTTTRSCFAAAVLDGMLYAIGGY-G 442

  Fly   442 DDIGGSMECYDPEQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGGCTTTTRHLPDLISFNPVTKEW 506
            .....|:|.|||.:|.|:::..|...|...||....|.|::|||....: ||..:..::|...:|
Mouse   443 PAHMNSVERYDPSKDSWEMVAPMADKRIHFGVGVMLGFIFVVGGHNGVS-HLSSIERYDPHQNQW 506

  Fly   507 NELARMQTARCQMGVAVLDRYLYVVGGSSISQDILSSVERYSFDEDKWTTVCALNVPRAIPAVVA 571
            .....|:..|..:|.||:|.|||||||.| ....|::|::|....|.|               :.
Mouse   507 TVCRPMKEPRTGVGAAVIDNYLYVVGGHS-GSSYLNTVQKYDPISDTW---------------LD 555

  Fly   572 ADGLLYVAGGDQPCEVNF 589
            :.|::|       |..||
Mouse   556 SAGMIY-------CRCNF 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045 39/105 (37%)
PHA03098 78..558 CDD:222983 161/546 (29%)
BACK 187..289 CDD:285009 36/107 (34%)
Kelch 330..384 CDD:128874 14/65 (22%)
KELCH repeat 374..417 CDD:276965 16/42 (38%)
Kelch 385..431 CDD:128874 15/45 (33%)
KELCH repeat 421..465 CDD:276965 15/43 (35%)
Kelch <447..478 CDD:128874 11/30 (37%)
Kelch_6 467..516 CDD:290672 13/48 (27%)
KELCH repeat 468..512 CDD:276965 12/43 (28%)
Kelch_1 515..557 CDD:279660 18/41 (44%)
KELCH repeat 516..561 CDD:276965 18/44 (41%)
KELCH repeat 564..617 CDD:276965 5/26 (19%)
Kelch 575..627 CDD:128874 4/15 (27%)
Klhl28NP_079983.1 PHA03098 35..553 CDD:222983 160/537 (30%)
Kelch 1 284..331 8/48 (17%)
KELCH repeat 321..372 CDD:276965 10/63 (16%)
Kelch 2 332..386 14/66 (21%)
KELCH repeat 376..419 CDD:276965 16/42 (38%)
Kelch 3 387..433 15/45 (33%)
KELCH repeat 423..465 CDD:276965 15/42 (36%)
Kelch 4 435..479 16/44 (36%)
KELCH repeat 469..513 CDD:276965 12/44 (27%)
Kelch 5 480..526 13/46 (28%)
KELCH repeat 516..559 CDD:276965 18/58 (31%)
Kelch 6 528..570 17/62 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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