DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and klhl4

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001314940.1 Gene:klhl4 / 559349 ZFINID:ZDB-GENE-070410-63 Length:567 Species:Danio rerio


Alignment Length:446 Identity:142/446 - (31%)
Similarity:230/446 - (51%) Gaps:35/446 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AASHRTNLPSYCNAQYPFKVLSNLNQ-------LREQSRFCDVEIIAGMATLSAHRAVLSAASAY 107
            |.|..:.:.|.|:.:: |:..::..|       ..:..:.|||.:|||...:.|||.||||.|.|
Zfish   139 ALSSFSRMSSNCSDEF-FQATNHAEQTFRKMETYLQHKQLCDVLLIAGDHKIPAHRLVLSAVSDY 202

  Fly   108 FEAMFRPELGLNEVKQKSVVLHTIDGDILHILLDFIYTGRCEITQSNVQELLAAADMLQLNEVVD 172
            |.|||..:  :.|.||:.:.:..:|.:.|..|:.|.|||..|:.:..::.|||||.:|||::|:.
Zfish   203 FAAMFTND--VREAKQEEIKMEGVDPEALRALVHFAYTGVLELKEETIESLLAAACLLQLSQVIQ 265

  Fly   173 GCCEFLCRELHASNALGILRFAEAHNCESLAKSALNFVHANFPAVTLEDEFLETPQTLLSQLLNS 237
            .||.||.::||.||.|||..||:|..|..|.|.|.|:...:|..|....|||..|...:.:||.|
Zfish   266 VCCNFLMKQLHPSNCLGIRSFADAQGCTDLLKVAHNYTMEHFLEVIQNQEFLLLPTMEIVKLLAS 330

  Fly   238 ELLRVDSESQVFQAALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVI-----DKALKDD--CRDM 295
            :.:.|..|..:|||.:.|::|||..|:..:..:|:::|:.|:|.:::     :|...:|  |:.:
Zfish   331 DDINVPDEETIFQALMMWVRHDVQHRQQDLGVLLAYIRLPLLPPQLLADLENNKMFSEDLECQKL 395

  Fly   296 ---SVKIALRSICRDIASKRGQLVPLRVCPRQLAKKNIYIIGGSHRDTPRTWNSADCIFETVAKF 357
               ::|..|      :..:|..|...|..||:....::|.:||.......|         |:.|:
Zfish   396 LMEAMKYHL------LPERRPMLQSPRTKPRKSTVGSLYAVGGMDASKGST---------TIEKY 445

  Fly   358 DIFRREWTETAPMEVGRILPGVSALNGKIYVVGGERGSQILANGEVYDPQNDVWQPIAPMIVPRC 422
            |:....|.:...|...|:..||:.::.|:|||||..|.:.....|.|:|...||..:.||...|.
Zfish   446 DLRTNRWIQVGVMNGRRLQFGVAVIDNKLYVVGGRDGLKTSNMVECYNPITKVWSTMPPMSTHRH 510

  Fly   423 EFGLCTMGGNLFAVGGWIGDDIGGSMECYDPEQDLWKLMGSMPQPRFSMGVVSFEG 478
            ..|:..:.|.::||||..|.....::|.:||:...|..:.||..||.::||.:..|
Zfish   511 GLGIAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVTALNG 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045 43/112 (38%)
PHA03098 78..558 CDD:222983 136/411 (33%)
BACK 187..289 CDD:285009 35/106 (33%)
Kelch 330..384 CDD:128874 12/53 (23%)
KELCH repeat 374..417 CDD:276965 15/42 (36%)
Kelch 385..431 CDD:128874 16/45 (36%)
KELCH repeat 421..465 CDD:276965 13/43 (30%)
Kelch <447..478 CDD:128874 10/30 (33%)
Kelch_6 467..516 CDD:290672 5/12 (42%)
KELCH repeat 468..512 CDD:276965 4/11 (36%)
Kelch_1 515..557 CDD:279660
KELCH repeat 516..561 CDD:276965
KELCH repeat 564..617 CDD:276965
Kelch 575..627 CDD:128874
klhl4NP_001314940.1 BTB 168..271 CDD:279045 41/104 (39%)
BTB 179..275 CDD:197585 42/97 (43%)
BACK 280..368 CDD:285009 31/87 (36%)
Kelch 427..472 CDD:128874 12/53 (23%)
Kelch_1 461..506 CDD:279660 16/44 (36%)
KELCH repeat 462..506 CDD:276965 16/43 (37%)
KELCH repeat 509..554 CDD:276965 14/44 (32%)
Kelch 522..566 CDD:128874 15/43 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.