DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and Klhl30

DIOPT Version :10

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001386261.1 Gene:Klhl30 / 316624 RGDID:1309644 Length:581 Species:Rattus norvegicus


Alignment Length:589 Identity:165/589 - (28%)
Similarity:257/589 - (43%) Gaps:76/589 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NLPSYCNAQYPFKVLSNLNQLREQSRFCDVEIIAGMATLSAHRAVLSAASAYFEAMFRPELGLNE 120
            :|||:..     .:|..|.:||...:..||.::.|...|..||::|:..|.||.|||..:..  |
  Rat    11 HLPSHAQ-----DMLEGLQRLRSLPKLADVTLLVGDQELPCHRSLLALNSPYFHAMFAGDFA--E 68

  Fly   121 VKQKSVVLHTIDGDILHILLDFIYTGRCEITQSNVQELLAAADMLQLNEVVDGCCEFLCRELHAS 185
            .....|.|..::...:..|:||:||||..||||||:.|..:|..|....|...|..:|.::|.|:
  Rat    69 SFSARVELRDVEPAAVGQLVDFVYTGRLTITQSNVEALTRSASRLHFPTVQKVCGRYLQQQLDAT 133

  Fly   186 NALGILRFAEAHNCESLAKSALNFVHANFPAVTLEDEFLETPQTLLSQLLNSELLRVDSESQVFQ 250
            |.|||..|.|......:|..|..|:..||.||..|||||:.|:..|:..|.|:||:|..|....:
  Rat   134 NCLGICEFGEQQGLLGVAAKAWAFLRENFEAVAQEDEFLQLPRDRLATCLASDLLQVQPEQSRLE 198

  Fly   251 AALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVIDKALKDDCRDMSVKIALRSICRDIASKRGQL 315
            |.|||::||...|..|:.::|:.|.:..:|...:.:.|..:     ..|.....|::..|:....
  Rat   199 ALLRWVRHDPQDRAAYLPELLNLVHLDALPRPCVQQLLATE-----PLIQESEACQEALSQGHSA 258

  Fly   316 VPLRVCPRQLAKKNIYIIG--------GSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEV 372
            .|..: |:::.:..:.:.|        |....:|.|.|.|  .:.|.|      |:|        
  Rat   259 EPPGL-PQKMQEVLVVVGGRALEEDEEGGEEPSPHTGNFA--FYNTKA------RQW-------- 306

  Fly   373 GRILP----------GVSALNGKIYVVGGERGSQI----LANGEVYDPQNDVWQPIAPMIVPRCE 423
             ..||          .::.||..:||.||.||::.    ......:..:..||:|:|||:..|..
  Rat   307 -MALPDFPDYHKWGFSLATLNSDVYVTGGSRGTKTDTWSTTQAWCFPLKEAVWKPVAPMLKARTN 370

  Fly   424 FGLCTMGGNLFAVGGWIGDDIGGSMECYDPEQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGGCTT 488
            .....:.|.::|:||...|.:  .:|.|||..|.|..:....:...:....|.:|.:|:||....
  Rat   371 HASTALNGEIYAIGGTALDAV--EVERYDPYTDSWAPVRPALKYVSNFSAASCQGRLYLVGSSAC 433

  Fly   489 TTRHLPDLISFNPVTKEWNELAR------MQTARCQMGVAVLDRYLYVVGGSSISQDILSSVERY 547
            ....|. |..::|||..|:.:|.      :.:.||    |.|:..||::|      |....|..|
  Rat   434 KYNMLA-LQCYSPVTDVWSVIASPFLPKYLSSPRC----AALNGALYLIG------DNTKKVYVY 487

  Fly   548 SFDEDKWTTVCALNVPRAIPAVVAADGLLYVAGGDQPCEVNFYRAQVTINAVECYDPLSDTWKNC 612
            ....:.|..|.:.:......|:|....||||.||........|..:     :|.||.:.|.|...
  Rat   488 DPGANLWQKVQSQHSLHENGALVPLGDLLYVTGGRWQGMDGDYHVE-----MEAYDTVRDAWARH 547

  Fly   613 PDLP 616
            ..||
  Rat   548 GSLP 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB_POZ_KLHL27_IPP 63..189 CDD:349565 42/125 (34%)
PHA03098 78..558 CDD:222983 141/507 (28%)
KELCH repeat 374..417 CDD:276965 14/56 (25%)
KELCH repeat 421..465 CDD:276965 12/43 (28%)
KELCH repeat 468..512 CDD:276965 12/49 (24%)
KELCH repeat 516..561 CDD:276965 12/44 (27%)
KELCH repeat 564..617 CDD:276965 16/53 (30%)
Kelch 575..627 CDD:128874 14/42 (33%)
Klhl30NP_001386261.1 BTB_POZ 1..137 CDD:453885 45/132 (34%)
PHA03098 29..494 CDD:222983 140/502 (28%)
BACK_KLHL30 128..231 CDD:350544 39/102 (38%)
KELCH repeat 319..364 CDD:276965 12/44 (27%)
KELCH repeat 368..410 CDD:276965 12/43 (28%)
KELCH repeat 413..455 CDD:276965 11/42 (26%)
KELCH repeat 462..499 CDD:276965 12/46 (26%)
KELCH repeat 504..551 CDD:276965 14/51 (27%)

Return to query results.
Submit another query.