DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and Klhl5

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001040558.1 Gene:Klhl5 / 305351 RGDID:1309661 Length:708 Species:Rattus norvegicus


Alignment Length:638 Identity:195/638 - (30%)
Similarity:316/638 - (49%) Gaps:72/638 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HEYNGNTSPNANANQNANQNPTGGGGDGDFFGQNLGSGATAASHRTNLPSYCNAQYPFKVLSNLN 74
            :|.:.::|..:|::|..:...|......|.|.|.|.                :|:..||.:.  |
  Rat   119 NESDSSSSRTSNSSQTLSSCQTMEPCSSDEFFQALN----------------HAEQTFKKME--N 165

  Fly    75 QLREQSRFCDVEIIAGMATLSAHRAVLSAASAYFEAMFRPELGLNEVKQKSVVLHTIDGDILHIL 139
            .||.: :.|||.::||...:.|||.|||:.|.||.|||..:  :.|.:|:.:.:..::.:.|..|
  Rat   166 YLRHK-QLCDVILVAGDRRIPAHRLVLSSVSDYFAAMFTND--VREARQEEIKMEGVEPNSLWSL 227

  Fly   140 LDFIYTGRCEITQSNVQELLAAADMLQLNEVVDGCCEFLCRELHASNALGILRFAEAHNCESLAK 204
            :.:.||||.|:.:.|::.||:.|.:|||::||:.||:||.::||.||.|||..||:|..|..|.|
  Rat   228 IQYAYTGRLELKEENIECLLSTACLLQLSQVVEACCKFLMKQLHPSNCLGIRSFADAQGCTDLHK 292

  Fly   205 SALNFVHANFPAVTLEDEFLETPQTLLSQLLNSELLRVDSESQVFQAALRWIKHDVTQRRCYVFD 269
            .|.|:...:|..|....||:..|...:::||.|:.:.:.:|..:..|.|.|::||:.||:..:..
  Rat   293 VAHNYTMEHFMEVIRNQEFVLLPANEIAKLLASDDMNIPNEETILNALLTWVRHDLEQRQKDLSK 357

  Fly   270 VLSHVRMALVPVKVI----DKAL-KDD--CRDM---SVKIALRSICRDIASKRGQLVPLRVCPRQ 324
            :|:::|:.|:..:.:    :.|| :||  |:.:   ::|..|      :..:|..|...|..||:
  Rat   358 LLAYIRLPLLAPQFLADMENNALFRDDIECQKLIMEAMKYHL------LPERRPMLQSPRTKPRK 416

  Fly   325 LAKKNIYIIGGSHRDTPRTWNSADCIFETVAKFDIFRREWTETAPMEVGRILPGVSALNGKIYVV 389
            .....::.:||.......|         ::.|:|:....||..|.|...|:..||:.|:.|:|||
  Rat   417 STVGTLFAVGGMDSTKGAT---------SIEKYDLRTNMWTPVANMNGRRLQFGVAVLDDKLYVV 472

  Fly   390 GGERGSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGGWIGDDIGGSMECYDPE 454
            ||..|.:.|...|.|:|:...|..:.||...|...|:..:.|.::||||..|.....::|.:||:
  Rat   473 GGRDGLKTLNTVECYNPKTKTWSVMPPMSTHRHGLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQ 537

  Fly   455 QDLWKLMGSMPQPRFSMGVVSFEGLIYIVGG-----CTTTTRHLPDLISFNPVTKEWNELARMQT 514
            ...|..:.:|..||.::||....|.:|.|||     |      |..:..|:|.|.:|...|:|..
  Rat   538 ARQWNFVATMSTPRSTVGVAVLSGKLYAVGGRDGSSC------LKSVECFDPHTNKWTLCAQMSK 596

  Fly   515 ARCQMGVAVLDRYLYVVGG-----SSISQDILSSVERYSFDEDKWTTVCALNVPRAIPAVVAADG 574
            .|..:||...:..||.:||     |:::..:...||||....|.||.|.::::.|....|.....
  Rat   597 RRGGVGVTTWNGLLYAIGGHDAPTSNLTSRLSDCVERYDPKTDMWTAVASMSISRDAVGVCLLGD 661

  Fly   575 LLYVAGGDQPCEVNFYRAQVTINAVECYDPLSDTWKNCPDLPVSRSEAGAVVV 627
            .||..||        |..|..:|.||.|||.::.|.....|.:.|  |||.||
  Rat   662 KLYAVGG--------YDGQTYLNIVEAYDPQTNEWTQVAPLCLGR--AGACVV 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045 41/105 (39%)
PHA03098 78..558 CDD:222983 157/499 (31%)
BACK 187..289 CDD:285009 32/106 (30%)
Kelch 330..384 CDD:128874 13/53 (25%)
KELCH repeat 374..417 CDD:276965 16/42 (38%)
Kelch 385..431 CDD:128874 16/45 (36%)
KELCH repeat 421..465 CDD:276965 12/43 (28%)
Kelch <447..478 CDD:128874 9/30 (30%)
Kelch_6 467..516 CDD:290672 17/53 (32%)
KELCH repeat 468..512 CDD:276965 15/48 (31%)
Kelch_1 515..557 CDD:279660 15/46 (33%)
KELCH repeat 516..561 CDD:276965 16/49 (33%)
KELCH repeat 564..617 CDD:276965 16/52 (31%)
Kelch 575..627 CDD:128874 18/51 (35%)
Klhl5NP_001040558.1 BTB 163..266 CDD:279045 40/107 (37%)
PHA03098 173..695 CDD:222983 173/552 (31%)
BACK 275..374 CDD:285009 30/98 (31%)
Kelch 422..467 CDD:128874 13/53 (25%)
Kelch_1 456..501 CDD:279660 17/44 (39%)
KELCH repeat 457..500 CDD:276965 16/42 (38%)
KELCH repeat 504..548 CDD:276965 12/43 (28%)
Kelch 517..561 CDD:128874 14/43 (33%)
KELCH repeat 551..594 CDD:276965 15/48 (31%)
Kelch 562..608 CDD:128874 15/51 (29%)
Kelch_1 597..648 CDD:279660 16/50 (32%)
KELCH repeat 598..648 CDD:276965 16/49 (33%)
Kelch_1 651..694 CDD:279660 15/50 (30%)
KELCH repeat 651..694 CDD:276965 15/50 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.