DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9426 and Ccin

DIOPT Version :10

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001005904.1 Gene:Ccin / 298392 RGDID:1359369 Length:588 Species:Rattus norvegicus


Alignment Length:570 Identity:117/570 - (20%)
Similarity:211/570 - (37%) Gaps:123/570 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 YCNAQYPFKVLSNLNQLREQSRFCDVEIIAGMATLSAHRAVLSAASAYFEAMFRPELGLNEVKQK 124
            :....|...||.|||:.|::..:.|:.:........|||.||:|.|...:::    :..|::|..
  Rat     5 FTEKNYNSFVLQNLNKQRKRKEYWDMALTVDHHVFFAHRNVLAAVSPLVKSL----VSSNDMKTT 65

  Fly   125 SVVLHTIDGDIL-----HILLDFIYTGRCEITQSNVQELLAAADMLQLNEVVDGCCEFLCRELHA 184
            ..:..|||.:.|     ..|||:.|:|:..|::.||:|||..|.......:...|.:||.:.:..
  Rat    66 DELYITIDPNYLSPATVDQLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRIHCNDFLIKSIRR 130

  Fly   185 SNALGILRFAEAHNCESLAKSALNFVHANF-----PAVTLEDEFLETPQTLLSQLLNSELLRVDS 244
            .|.|..|..||....:.::..|.:.:..||     |..::  .|:..|..:..:||..|.|.|.:
  Rat   131 VNCLRYLFLAELFELKEVSDLAYSGIRDNFHFWASPEGSM--HFMRCPPVIFGRLLRDENLHVLN 193

  Fly   245 ESQVFQAALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVIDKALKDDCRDMSVKIALRSICRDIA 309
            |.|...|.:.|:.....:|..|.....:::.:..|                              
  Rat   194 EDQALSALINWVYFRKEEREKYFKKFFNYINLNAV------------------------------ 228

  Fly   310 SKRGQLVPLRVCPRQLAKKNIYIIGGSHRDTPRTWNSADC-IFETVAKFDIFRREWTETAPMEVG 373
                              .|..::..|::.|....|||.. :.|:|.   :.|::....:.:...
  Rat   229 ------------------SNKTLMFASNKLTGLENNSAHATLIESVL---MDRKQERPCSLLSYQ 272

  Fly   374 RILPGVSALNGKIYVVGGERGSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGG 438
            |    ..||...:.::||::     |:|:..|                          .:||   
  Rat   273 R----KGALLDSVVILGGQK-----AHGKFND--------------------------GVFA--- 299

  Fly   439 WIGDDIGGSMECYDPEQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGGCTTTTRHLPDLISFNPVT 503
                        |..:::||..:..||....::...:....|||.||.|.....|.....::...
  Rat   300 ------------YIIQENLWLKLSEMPYRAAALSATAAGRYIYISGGTTEQISGLKTAWRYDMDD 352

  Fly   504 KEWNELARMQTARCQMGVAVLDRYLYVVGGSSISQDILSSVERYSFDEDKWTTVCALNVPRAIPA 568
            ..|.:|..:........:......:|.||||...:..:|::.||...::.|.....:::|....|
  Rat   353 NSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIYRYDERKEAWCLAGKMSIPMDGTA 417

  Fly   569 VVA-ADGLLYVAGGDQPCEVNFYRAQVTINAVECYDPLSDTWKNCPDLPV 617
            |:. .|..||:..|  .|.|..|.::|.:  |:|:|..:.....|...|:
  Rat   418 VITKGDRNLYIVTG--RCLVKGYISRVGV--VDCFDTCTGEVVQCITFPI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB_POZ_KLHL27_IPP 63..189 CDD:349565 37/130 (28%)
PHA03098 78..558 CDD:222983 94/490 (19%)
KELCH repeat 374..417 CDD:276965 8/42 (19%)
KELCH repeat 421..465 CDD:276965 5/43 (12%)
KELCH repeat 468..512 CDD:276965 9/43 (21%)
KELCH repeat 516..561 CDD:276965 9/44 (20%)
KELCH repeat 564..617 CDD:276965 14/53 (26%)
Kelch 575..627 CDD:128874 12/43 (28%)
CcinNP_001005904.1 BTB_POZ_calicin 27..123 CDD:349616 27/99 (27%)
PHA03098 41..462 CDD:222983 108/531 (20%)
BACK 130..208 CDD:475122 20/79 (25%)
Kelch 1 280..327 12/92 (13%)
KELCH repeat 317..362 CDD:276965 9/44 (20%)
Kelch 2 328..375 9/46 (20%)
KELCH repeat 365..409 CDD:276965 9/43 (21%)
Kelch 3 377..423 12/45 (27%)
Kelch 4 425..475 12/43 (28%)
Kelch 5 476..525
Kelch 6 526..580
Blue background indicates that the domain is not in the aligned region.

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