DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and Klhl12

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:XP_038946329.1 Gene:Klhl12 / 266772 RGDID:628717 Length:592 Species:Rattus norvegicus


Alignment Length:616 Identity:203/616 - (32%)
Similarity:297/616 - (48%) Gaps:68/616 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ATAASH--RTNLPSYCNA-------QYPFKVLSNLNQLREQSRFCDVEIIAGMATLSAHRAVLSA 103
            |.||||  :|.|.....|       .:...:|:::|.||:.:..|||.:........|||.||:|
  Rat     6 ARAASHEEQTRLMGGIMAPKDIMTNTHAKSILNSMNSLRKSNTLCDVTLRVEQKDFPAHRIVLAA 70

  Fly   104 ASAYFEAMFRPELG-----LNEVKQKSVVLHTIDGDILHILLDFIYTGRCEITQSNVQELLAAAD 163
            .|.||.|||..|:.     |:|..:..|.:..:....:.|||||:||....:|..||||||.||.
  Rat    71 CSDYFCAMFTSEVNASLCYLSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAAC 135

  Fly   164 MLQLNEVVDGCCEFLCRELHASNALGILRFAEAHNCESLAKSALNFVHANFPAVTLEDEFLETPQ 228
            :|||..|...|||||..:|..||.|||..|||.|||..|.::|..|...:||.|...:||:...|
  Rat   136 LLQLKGVKQACCEFLESQLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEVVQHEEFILLSQ 200

  Fly   229 TLLSQLLNSELLRVDSESQVFQAALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVIDKALKDDCR 293
            ..:.:|:..:.::||||..||:|.:.|:||...:|...:.|:|.:|||.|:..:.|     .|..
  Rat   201 GEVEKLIKCDEIQVDSEEPVFEAVINWVKHAKKEREESLPDLLQYVRMPLLTPRYI-----TDVI 260

  Fly   294 DMSVKIALRSICRDIASK----------RGQLVPLRVCPRQLAKKNIYIIGGSHRDTPRTWNSAD 348
            |....|.....|||:..:          |.|:...|...|..|.:.:.::||        :.|..
  Rat   261 DAEPFIRCSLQCRDLVDEAKKFHLRPELRSQMQGPRTRARLGANEVLLVVGG--------FGSQQ 317

  Fly   349 CIFETVAKFDIFRREWTETAPMEVGRILPGVS---------ALNGKIYVVGGERGSQILANGEVY 404
            ...:.|.|:|...:||:         .||.::         :|:.:|||:||..|...|::.|..
  Rat   318 SPIDVVEKYDPKTQEWS---------FLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECL 373

  Fly   405 D---PQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGGWIGDDIGGSMECYDPEQDLWKLMGSMPQ 466
            |   .::.||..:|||.|.|...|..|:|..::..||:.|.....|||.|||..|.|.::|.|..
  Rat   374 DYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT 438

  Fly   467 PRFSMGVVSFEGLIYIVGGCTTTTRHLPDLISFNPVTKEWNELARMQTARCQMGVAVLDRYLYVV 531
            .|...|:|...|:||.:|| ......|..:..::|.|..|..:..|.|.|...|||:|:.::|||
  Rat   439 AREGAGLVVASGIIYCLGG-YDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVV 502

  Fly   532 GGSSISQDILSSVERYSFDEDKWTTVCALNVPRAIPAVVAADGLLYVAGGDQPCEVNFYRAQVTI 596
            ||...:.. |||||.|:...|.||||.::..||.........|.||...|        |.....:
  Rat   503 GGFDGTAH-LSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAG--------YDGNSLL 558

  Fly   597 NAVECYDPLSDTWKNCPDLPVSRSEAGAVVV 627
            :::|||||:.|:|:....:...|.:||..|:
  Rat   559 SSIECYDPIIDSWEVVASMGTQRCDAGVCVL 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045 46/110 (42%)
PHA03098 78..558 CDD:222983 172/506 (34%)
BACK 187..289 CDD:285009 37/101 (37%)
Kelch 330..384 CDD:128874 11/62 (18%)
KELCH repeat 374..417 CDD:276965 15/54 (28%)
Kelch 385..431 CDD:128874 18/48 (38%)
KELCH repeat 421..465 CDD:276965 16/43 (37%)
Kelch <447..478 CDD:128874 13/30 (43%)
Kelch_6 467..516 CDD:290672 14/48 (29%)
KELCH repeat 468..512 CDD:276965 12/43 (28%)
Kelch_1 515..557 CDD:279660 19/41 (46%)
KELCH repeat 516..561 CDD:276965 21/44 (48%)
KELCH repeat 564..617 CDD:276965 13/52 (25%)
Kelch 575..627 CDD:128874 14/51 (27%)
Klhl12XP_038946329.1 BTB_POZ_KLHL12_C3IP1_DKIR 29..159 CDD:349551 50/129 (39%)
PHA03098 63..574 CDD:222983 184/542 (34%)
BACK_KLHL12 154..289 CDD:350527 46/139 (33%)
KELCH repeat 298..339 CDD:276965 12/57 (21%)
KELCH repeat 343..389 CDD:276965 13/45 (29%)
KELCH repeat 393..436 CDD:276965 16/42 (38%)
KELCH repeat 440..483 CDD:276965 12/43 (28%)
KELCH repeat 487..531 CDD:276965 21/44 (48%)
KELCH repeat 534..579 CDD:276965 13/52 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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