DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and spe-26

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_501919.1 Gene:spe-26 / 177929 WormBaseID:WBGene00004972 Length:570 Species:Caenorhabditis elegans


Alignment Length:634 Identity:134/634 - (21%)
Similarity:232/634 - (36%) Gaps:163/634 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 YCNAQYPFKVLSNLNQLREQSRFCDVEIIAGMATLSAHRAVLSAASAYFEA-MFRPELG--LNEV 121
            :||:    |:.|..|:       |||             |::|.....||. :...|:.  ||.:
 Worm     3 FCNS----KLTSIDNR-------CDV-------------AIISKDEERFEVKLVESEIARELNRL 43

  Fly   122 -------KQKSVVLHTIDGDILHIL-LDFIYTGRCEI----TQSNVQELLAAAD-----MLQLNE 169
                   .||::::......:.::| |:.:.....|:    .:.:::|:.....     :|::..
 Worm    44 GALSPRSMQKNILVPFTTQTVKYLLGLEKVSDSTDEMGWFGIEKSLEEIAGFGQHCFPKILEMKN 108

  Fly   170 VVDGCCEFLCRELHASNALGILRFAEAHNCESLAKSALNFVHANFPAVTLED-----EFLETPQT 229
            .:   |:.:...|...|...:.:.....:|::.|...|.::..|...:.:.|     ||...|..
 Worm   109 TI---CDHILSTLSDVNCFLLHKKFREFDCQNHAHKTLEYILYNLARMVVVDKRVDVEFYRLPVE 170

  Fly   230 LLSQLLNSELLRVDSESQVFQAALRWIKHDVTQRRCYVFDVLSHVRMALVPVKVIDKALKDDCRD 294
            .:..||:||.:.|:.|:|:.:...:||..|...|     |....:.|:.|....:|:.:......
 Worm   171 EVKHLLSSEEVNVEQETQIIEVINQWIAADFENR-----DKFRPMLMSTVRFLALDQQIAKSLSQ 230

  Fly   295 M--SVKIALRSICRDIASKRGQLVPLRVC--------------------PRQLAKKN-------I 330
            .  |:|.|.|:  ||:....|..:..:.|                    |..||...       :
 Worm   231 FHPSLKPARRT--RDVLIIIGGWLHRQACDRIEWFDPENNCWKVSQQKLPTTLAYHGSAIVDGIL 293

  Fly   331 YIIGGS--HRDTPRTWNSADCIFETVAKFDIFRREWTE-TAPMEVGRILPGVSAL-NGKIYVVGG 391
            |:.|||  .|....||           |......:|.. ...||....:...|.: :|:|||.||
 Worm   294 YLFGGSTGQRTRCETW-----------KLSTETWQWDRCNNMMEPRNYISNSSVVYDGRIYVFGG 347

  Fly   392 ERGSQIL------ANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGGWIGDDIGGSMEC 450
            :...:|.      ..|||:||:.:.|...|.:...|.:.........::..||:.||.|..|:|.
 Worm   348 QNFREITRTAVRSRTGEVFDPKTNKWTETASLSDMRSDCAAEVFENQIYVSGGFNGDMILASVEV 412

  Fly   451 YDPEQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGGCTTTTRHLPDLISFNPV-----TKEWNE-- 508
            |:|..:::.....:|.|.....:::....:.||||.....|.       |.:     |.||.:  
 Worm   413 YNPIGNVFSRTVDLPYPITGHCLLNHGNQLLIVGGFDGAERQ-------NKIWMWHRTGEWQQRP 470

  Fly   509 ----LARMQTARCQMGVAVLDRYLYVVGGSS----ISQDIL---SSVERYSFDEDKWTTVCALNV 562
                ..|..:|.|.     ...:|:.|.|.:    .:.:||   .:..|:||..|         |
 Worm   471 EKLIYGRSTSAACS-----YKGWLFSVAGYTEKVEATCEILLPEPNASRFSFIPD---------V 521

  Fly   563 PRAIPA--VVAADGLLYVAGGDQPCEVNFYRAQVTIN--AVECYDPLSD 607
            |||..|  |:.|           |...||...:.|||  ::|..|...|
 Worm   522 PRAKSALNVLVA-----------PNWRNFLERRGTINEQSMEMDDDYED 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045 19/125 (15%)
PHA03098 78..558 CDD:222983 113/561 (20%)
BACK 187..289 CDD:285009 23/106 (22%)
Kelch 330..384 CDD:128874 12/57 (21%)
KELCH repeat 374..417 CDD:276965 15/49 (31%)
Kelch 385..431 CDD:128874 14/51 (27%)
KELCH repeat 421..465 CDD:276965 10/43 (23%)
Kelch <447..478 CDD:128874 6/30 (20%)
Kelch_6 467..516 CDD:290672 11/59 (19%)
KELCH repeat 468..512 CDD:276965 9/54 (17%)
Kelch_1 515..557 CDD:279660 11/48 (23%)
KELCH repeat 516..561 CDD:276965 10/51 (20%)
KELCH repeat 564..617 CDD:276965 14/48 (29%)
Kelch 575..627 CDD:128874 9/35 (26%)
spe-26NP_501919.1 BACK 131..223 CDD:197943 23/96 (24%)
Kelch 244..291 CDD:128874 5/46 (11%)
Kelch_1 282..325 CDD:279660 10/53 (19%)
KELCH repeat 282..324 CDD:276965 10/52 (19%)
KELCH repeat 328..380 CDD:276965 15/51 (29%)
Kelch 341..393 CDD:128874 14/51 (27%)
KELCH repeat 383..428 CDD:276965 10/44 (23%)
Kelch 394..440 CDD:128874 11/45 (24%)
KELCH repeat 430..471 CDD:276965 9/47 (19%)
Kelch 441..487 CDD:128874 12/57 (21%)
KELCH repeat 477..522 CDD:276965 12/58 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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