DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9426 and kel-3

DIOPT Version :9

Sequence 1:NP_609616.1 Gene:CG9426 / 34719 FlyBaseID:FBgn0032485 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_499784.2 Gene:kel-3 / 176775 WormBaseID:WBGene00002185 Length:591 Species:Caenorhabditis elegans


Alignment Length:573 Identity:162/573 - (28%)
Similarity:254/573 - (44%) Gaps:83/573 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LPSYCNAQYPF-----------KVLSNLNQLREQSRFCDVEIIAGMATLSAHRAVLSAASAYFEA 110
            :|.|.:....|           |..|..|:||.:.:.|||.::.....||||:.:|:|...||..
 Worm    14 IPLYTDDDLDFIKVDILDEMYKKSYSIFNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRG 78

  Fly   111 MFRPELGLNEVKQKSVVLHTIDGDI----LHILLDFIYTGRCEITQSNVQELLAAADMLQLNEVV 171
            ||  .|.|.|...|.:.:.  |.|:    :..||.|.|||...||.||||.::..|:..|:.|||
 Worm    79 MF--TLDLMEANMKEINIE--DSDMNYETVDALLSFAYTGELRITTSNVQSIMLGANFFQMLEVV 139

  Fly   172 DGCCEFLCRELHASNALGILRFAEAHNC--ESLAKSALNFVHANFPAVTLEDEFLETPQTLLSQL 234
            ..|..||...||.||||.|..|.:. .|  |.:.:...:::..:|.||:.:::|.........:|
 Worm   140 QHCGNFLLTRLHPSNALSIREFCKM-MCVEEKITEMTDDYIQKHFMAVSKDEDFKRLSLEDAIEL 203

  Fly   235 LNSELLRVDSESQVFQAALRWIKHDVTQRRCYVFDVLSHVRMALV------PVKVIDKALKDD-- 291
            |.::.|.||||.||:.||:.|:..||. |......:|..||:.|:      .:...:..:|.|  
 Worm   204 LRNDHLYVDSEEQVYVAAMEWLNCDVI-RHEQAAKILPCVRLPLLSPTYLSSIVASNPIIKKDIP 267

  Fly   292 CRDMSVKIALRSICRD---IASKRGQLVPLRVCPR--QLAKKNIYIIGG-SHRD----------- 339
            |||      |....:|   :..:|..:...:..||  |:....|..||| .|:.           
 Worm   268 CRD------LIDEAKDYHLLPDRRSLIKSFKCTPRLCQIVPGLIVAIGGLMHQSQSKSSVEIYDP 326

  Fly   340 TPRTWNSADCI---------------------------FETVAKFDIFRREWTETAPMEVGRILP 377
            |.:.|:..|.:                           .:.|.|||....:||..:|:...|...
 Worm   327 TSKKWSPIDGMVTLRTRVGVAVNQRQVYAIGGFNGQDRLDLVEKFDYDTLKWTTLSPLTRKRSAL 391

  Fly   378 GVSALNGKIYVVGGERGSQILANGEVYDPQNDVWQPIAPMIVPRCEFGLCTMGGNLFAVGGWIGD 442
            ..:.:..::||.||..|...|::.|:||...:||:...||...|...|:..:..:::..||..|.
 Worm   392 AAAFVTNRLYVCGGYDGLHSLSSIEIYDINRNVWEAGPPMENMRSAAGVTVIDKHIYICGGHDGM 456

  Fly   443 DIGGSMECYDPEQDLWKLMGSMPQPRFSMGVVSFEGLIYIVGGCTTTTRHLPDLISFNPVTKEWN 507
            .|..|:|..|.|...|:.:.||.|.|...|..:|:|.||:.||...|: .|..:..::||.|:|:
 Worm   457 QIFASVERLDTENQQWERIPSMIQQRCRFGAATFKGKIYVAGGYDGTS-FLKSVEVYDPVEKKWS 520

  Fly   508 ELARMQTARCQMGVAVLDRYLYVVGGSSISQDILSSVERYSFDEDKWTTVCAL 560
            .::.|...|.::.:...:..|:.|.|.. .::.|.|:|:|....|.||...||
 Worm   521 PVSPMNMRRSRVSLVSTNEGLFAVAGFD-GENNLCSMEQYDDVTDSWTIATAL 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9426NP_609616.1 BTB 73..179 CDD:279045 41/109 (38%)
PHA03098 78..558 CDD:222983 152/537 (28%)
BACK 187..289 CDD:285009 29/109 (27%)
Kelch 330..384 CDD:128874 16/92 (17%)
KELCH repeat 374..417 CDD:276965 12/42 (29%)
Kelch 385..431 CDD:128874 15/45 (33%)
KELCH repeat 421..465 CDD:276965 12/43 (28%)
Kelch <447..478 CDD:128874 11/30 (37%)
Kelch_6 467..516 CDD:290672 15/48 (31%)
KELCH repeat 468..512 CDD:276965 14/43 (33%)
Kelch_1 515..557 CDD:279660 11/41 (27%)
KELCH repeat 516..561 CDD:276965 13/45 (29%)
KELCH repeat 564..617 CDD:276965
Kelch 575..627 CDD:128874
kel-3NP_499784.2 BTB_POZ 32..149 CDD:365784 44/120 (37%)
PHA03098 51..568 CDD:222983 151/530 (28%)
KELCH repeat 341..384 CDD:276965 6/42 (14%)
KELCH repeat 388..431 CDD:276965 12/42 (29%)
KELCH repeat 435..479 CDD:276965 12/43 (28%)
KELCH repeat 482..527 CDD:276965 15/45 (33%)
KELCH repeat 529..572 CDD:276965 11/43 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.